BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03610 (UTR included)
(2227 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2724_C1 1495 0.0
>BF14_2724_C1
Length = 808
Score = 1495 bits (754), Expect = 0.0
Identities = 798/809 (98%), Gaps = 3/809 (0%)
Strand = Plus / Plus
Query: 1379 gccatcacctgtagatgggaatatgaggtatcgttggcgagtggacctctctcgttctga 1438
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatcacctgnagatgggaatatgaggtatcgttggcgagtggacctctctcgttctga 60
Query: 1439 gcgtcactggtcggggtggttcagtggcctatcgggttcgttcctctcaacgccagcacc 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgtcactggtcggggtggttcagtggcctatcgggttcgttcctctcaacgccagcacc 120
Query: 1499 cagactgttactgctcgcctccgtcgacggactggacagggacctcacagtcggacagat 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagactgttactgctcgcctccgtcgacggactggacagggacctcacagtcggacagat 180
Query: 1559 gcagggcaaattccagatgcaagttctaacgagatgtggtcacgctgttcacgaggacac 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcagggcaaattccagatgcaagttctaacgagatgtggtcacgctgttcacgaggacac 240
Query: 1619 gccatcagaggtggcccgcgtggtcgcatcgttcgcgctacgtcaccgtctcacagtccc 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccatcagaggtggcccgcgtggtcgcatcgttcgcgctacgtcaccgtctcacagtccc 300
Query: 1679 gaccgagaccggggaggacatgaacctgatctccgcccccggatgctaaacattataata 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaccgagaccggggaggacatgaacctgatctccgcccccggatgctaaacattataata 360
Query: 1739 ataaagttatttatatttgcatgctttttaatacctatctgactgttctcgaatgtttcc 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ataaagttatttatatttgcatgctttttaatacctatctgactgttctcgaatgtttcc 420
Query: 1799 attttatctatacagataatatatagtagagtacgcgagctgagtcagcacagataacaa 1858
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 421 attttatctatacagataatatatagtagagtacgcgagctaagtcagcacagataacaa 480
Query: 1859 atattttaatcatttgaatacttttggaatagttattttttttttatcaaaacgttggtg 1918
|||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||
Sbjct: 481 atattttaatcatttgaatactttcggaatagtta-ttttttttaatcaaaacgttggtg 539
Query: 1919 tgtagtgaaattaagctcagaataaaattatgtaattaagaaaatatataaaagcttttt 1978
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 540 tctagtgaaattaagctcagaataaaattatgtaattaagaaaagatataaaagcttttt 599
Query: 1979 tt-tattagaattttacatatctttatatagctggtactctactgtattatcttgattgt 2037
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttatattagaattttacatatctttatatagctggtactctactgtattatcttgattgt 659
Query: 2038 tgtcttgaatttgaggctttag-ttaagttgtgcttggtgcggacttgaactgtcacctt 2096
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 660 tgtcttgactttgaggctttagtttaagttgtgcttggtgcggacttgaactgtcacctt 719
Query: 2097 aagcatttgaacgtttttaattcataaatttgtcaaaaaatttacaaaactttcaattgg 2156
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aagcatttggacgtttttaattcataaatttgtcaaaaaatttacaaaactttcaattgg 779
Query: 2157 catcgatatcaacacaatgaaagtggttt 2185
|||||||||||||||||||||||||||||
Sbjct: 780 catcgatatcaacacaatgaaagtggttt 808
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,196
Number of extensions: 6450
Number of successful extensions: 6450
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6447
Number of HSP's successfully gapped: 1
Length of query: 2227
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2210
Effective length of database: 8,119,229
Effective search space: 17943496090
Effective search space used: 17943496090
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)