BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03622 (UTR included)
(1795 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1593_C1 1445 0.0
>BF14_1593_C1
Length = 785
Score = 1445 bits (729), Expect = 0.0
Identities = 771/785 (98%)
Strand = Plus / Plus
Query: 405 atttactaagtcacttaaacctttcattagatatatttagtgtagatttcataggtgttc 464
||||||||| ||| | |||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 1 atttactaaatcattaaaacgtttcatttaatatatttagtgtacatttcataggtgtta 60
Query: 465 actatggccgactccacattaaacgatgtaagcaaaatgaaagtggttgatctacgaaaa 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actatggccgactccacattaaacgatgtaagcaaaatgaaagtggttgatctacgaaaa 120
Query: 525 gaactgaaatcacgtggactctcttatgccggcgacaaagcagaacttgtggcaagattg 584
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 gaactgaaatcacgtggactctcttatgccggcgataaagcagaacttgtggcaagattg 180
Query: 585 caaggctccatggcccaagacgatcacggagatattaatttggattcagacgaaatagat 644
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaggctccatggcccaagacgatcacggagatattaatttggattcagacgaaatagac 240
Query: 645 tcggacggagttctagatgatgaggatgataaaagtcaaaacgatatcctggatgatgca 704
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 tcggacggagttctagatgatgaggatgacaaaagtcaaaacgatatcctggatgatgca 300
Query: 705 gcggttgatacattgactgaggaactagccttggaagagaagtcgcctttaaaggaagct 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcggttgatacattgactgaggaactagccttggaagagaagtcgcctttaaaggaagct 360
Query: 765 gtagaagcgaaaccgcctagaactctcaaacgaagaataacatctgacacaacaaagaca 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtagaagcgaaaccgcctagaactctcaaacgaagaataacatctgacacaacaaagaca 420
Query: 825 gttgaaaataaagatgctggttcaaagaaaattgtactcaatagaaacgcatccattttg 884
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgaaaataaagatgcaggttcaaagaaaattgtactcaatagaaacgcatccattttg 480
Query: 885 aatacaagaaaatctatcgacgaagaaaagaaagtaacagaaaaacctaatgaacccata 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatacaagaaaatctatcgacgaagaaaagaaagtaacagaaaaacctaatgaacccata 540
Query: 945 acagactcagtaaatgcaaataaaactgaaactaacaagataagaataactgctgatata 1004
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acagacacagcaaatgcaaataaaactgaaactaacaagataagaataactgctgatata 600
Query: 1005 gacccaaagaccagaatggaaatgcgtgcaaaacgttttggtttaccagtaaaaatgaca 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gacccaaagaccagaatggaaatgcgtgcaaaacgttttggtttaccagtaaaaatgaca 660
Query: 1065 gacgaacagaggaaggaggccagaaaacagagatttaaccaaaactcaaacagtgtaaat 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gacgaacagaggaaggaggccagaaaacagagatttaaccaaaactcaaacagtgtaaat 720
Query: 1125 actgaaagcaaagttataactactgtggataacccatctctgtctgacaacctcgataaa 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actgaaagcaaagttataactactgtggataacccatctctgtctgacaacctcgataaa 780
Query: 1185 ctgaa 1189
|||||
Sbjct: 781 ctgaa 785
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 243,804
Number of extensions: 4941
Number of successful extensions: 4941
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4941
Number of HSP's successfully gapped: 1
Length of query: 1795
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1778
Effective length of database: 8,119,229
Effective search space: 14435989162
Effective search space used: 14435989162
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)