BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03625 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2H06 1316 0.0
>BF01054B2H06
Length = 854
Score = 1316 bits (664), Expect = 0.0
Identities = 721/741 (97%)
Strand = Plus / Plus
Query: 374 gattaaaaaaaattaaaaatatgtgaaataaagattagcaatttagaggcaaaaagattc 433
|||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 114 gatttaaaaaaaataaaaatatgtgaaataaaaattagcaatttagaggcaaaaagattg 173
Query: 434 aaaaactgctcgttaaatagttaccggaaatctttatcttcacttttatagaaattaaaa 493
|||| ||| |||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct: 174 aaaagctggtcgttaaatactaaccggaaatctttatcttcacttttacagaaattaaaa 233
Query: 494 aaatataatgtgcggtcgaactagtttatcgctcaataaggaacaagtacgatgtgcttg 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aaatataatgtgcggtcgaactagtttatcgctcaataaggaacaagtacgatgtgcttg 293
Query: 554 tgcctacaaatcaagaaaggaaaatgtttatgtgaaaccagaatggaaaccagaacataa 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgcctacaaatcaagaaaggaaaatgtttatgtgaaaccagaatggaaaccagaacataa 353
Query: 614 taatggaaaagattttattccctcatataatattgctccaacagacataactcctgtgtt 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 taatggaaaagattttattccctcatataatattgctccaacagacataactcctgtgtt 413
Query: 674 aattgctggtaatgattttaagacttccagctctttagtaaggatacttaaacccatgtt 733
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aattgctggtaatgactttaagacttccagctctttagtaaggatacttaaacccatgtt 473
Query: 734 gtggggtataataccaccatggcaccagggtgattacaaaagccacaatgttagcacaaa 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gtggggtataataccaccatggcaccagggtgattacaaaagccacaatgttagcacaaa 533
Query: 794 caattgtcggatagaaaatatcaaaacttcaaaactgtacagcccgatactgcagaatgg 853
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 caattgtcggctagaaaatatcaaaacttcaaaactgtacagcccgatactgcagaatgg 593
Query: 854 aggccgctgcataatcattgctgaagggttttacgaatggcagacaactgtgaaaagtaa 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aggccgctgcataatcattgctgaagggttttacgaatggcagacaactgtgaaaagtaa 653
Query: 914 aactaagcaaccatattacatatatatgccacaaggtgataaaaatgagacaaaagacac 973
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 654 aactaagcaaccatattacatatatatgccacaaggcgataaaaatgagacaaaagacat 713
Query: 974 gtcagaagataaatttagtgaaataaatggatgggatggggtaaagcttatatacatggc 1033
||||||||||||||||||||||||||| ||||||||||| || ||||||| |||||||
Sbjct: 714 gtcagaagataaatttagtgaaataaacggatgggatggcgtnnngcttatacacatggc 773
Query: 1034 tggcatttataatatatggaaaagtgaagacataattatatattcatattccataataac 1093
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 cggcatttataatatatggaaaagtgaagacataattatatattcatattccataataac 833
Query: 1094 tatggaatcaaatgacactat 1114
|||||||||||||||||||||
Sbjct: 834 tatggaatcaaatgacactat 854
Score = 99.6 bits (50), Expect = 2e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 cccatataattttcttgattaaggggttagatcaatggttcccaaatttattttgtct 58
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 cccagataattttcttaattaaggggttagatcaatggttcccaaatttattttgtct 108
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 320,418
Number of extensions: 7275
Number of successful extensions: 7275
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7274
Number of HSP's successfully gapped: 2
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)