BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03717 (UTR included)
(1342 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B2A06 1328 0.0
>BF01053B2A06
Length = 747
Score = 1328 bits (670), Expect = 0.0
Identities = 705/716 (98%), Gaps = 3/716 (0%)
Strand = Plus / Plus
Query: 484 aggctttaacagaaagaatgtcgaggtttagactgcgacggcaatacgatgggtatgttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 aggctttaacagaaagaatgtcgaggtttagactgcgacggcaatacgatgggtatgttt 94
Query: 544 ctgtgcctcatgatgatagtggattttcagacgctcagtttgaggtgcctcctttgaaga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 ctgtgcctcatgatgatagtggattttcagacgctcagtttgaggtgcctcctttgaaga 154
Query: 604 taccctggaaagctctaagcttggctgcatttctatttgttgtgggaacatcgttattga 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 taccctggaaagctctaagcttggctgcatttctatttgttgtgggaacatcgttattga 214
Query: 664 ttgttggaagtcttatagtcaccggtcagatcgatacaaagtattccgaccgtctttggc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ttgttggaagtcttatagtcaccggtcagatcgatacaaagtattccgaccgtctttggc 274
Query: 724 ctatgattgttttgggctgtatcatgtttcttcctggtgcatatcatatgaggatagctt 783
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 275 ctatgattgttttgggctgtatcatgtttctccctggtgcatatcatatgaggatagctt 334
Query: 784 attatgcttacaaagagtatccaggatacagtttcggagacattcccgagtttgaatagt 843
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 attatgcttacaaagaatatccaggatacagtttcggagacattcccgagtttgaatagt 394
Query: 844 ctgcagttattttcattgttacaaataatgtagataatttatttatacaataatgctgta 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ctgcagttattttcattgttacaaataatgtagataatttatttatacaataatgctgta 454
Query: 904 aataattgtagcaaggatgcggtgtgcatccaaatgtattgttttcaattaagttaactg 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aataattgtagcaaggatgcggtgtgcatccaaatgtattgttttcaattaagttaactg 514
Query: 964 taatttagtgcaacagtcttatttgaaaccagttagattactgatatgaaattatggcat 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 taatttagtgcaacagtcttatttgaaaccagttagattactgatatgaaattatggcat 574
Query: 1024 atgtactcatttctttgtaagtggtctcattaatattgtataatataattattagttgtc 1083
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 575 atgtactcatttctttgtaagtggtctcgttaatattgtataatataattaatagttgtc 634
Query: 1084 ggacagcggcttagttataattatttagtctctgattaaattgtatttcatttgtaaatt 1143
|||| ||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 635 agaca---gcttagttataattatttagtctctgaattaattgtatttgatttgtaaatt 691
Query: 1144 tgttacaattgtataaatactatacattatatagtttataaacacaaatgatctgt 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tgttacaattgtataaatactatacattatatagtttataaacacaaatgatctgt 747
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 366 tatttaaaattagtataccaagacaaaaacattaagg 402
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatttaaaattagtataccaagacaaaaacattaagg 37
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,259
Number of extensions: 4324
Number of successful extensions: 4324
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4323
Number of HSP's successfully gapped: 2
Length of query: 1342
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1325
Effective length of database: 8,119,229
Effective search space: 10757978425
Effective search space used: 10757978425
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)