BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03737 (UTR included)
(1588 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043B1A05 1378 0.0
>BF01043B1A05
Length = 769
Score = 1378 bits (695), Expect = 0.0
Identities = 721/729 (98%), Gaps = 2/729 (0%)
Strand = Plus / Plus
Query: 491 tttcaacaagatgcctctccagctgaccaaacaagctcctcagtggaagaccacggccgt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tttcaacaagatgcctctccagctgaccaaacaagctcctcagtggaagaccacggccgt 100
Query: 551 cgtcaacggcgagttcaaggacatcgctctgtccgactacaaggggaaatacgttgtgct 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 cgtcaacggcgagttcaaggacatcgctctgtccgactacaaggggaaatacgttgtgct 160
Query: 611 gttcttctaccccctggacttcacgttcgtgtgccctaccgagatcatcgctttctcgga 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gttcttctaccccctggacttcacgttcgtgtgccctaccgagatcatcgctttctcgga 220
Query: 671 gcgcgcggacgagttccgcaagttgggatgtgaggtgatcgccgcctccacggactcgca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gcgcgcggacgagttccgcaagttgggatgtgaggtgatcgccgcctccacggactcgca 280
Query: 731 cttcactcacctggcgtggatcaacacgcccaggaagcagggcggtctgggacccatgaa 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cttcactcacctggcgtggatcaacacgcccaggaagcagggcggtctgggacccatgaa 340
Query: 791 catccccatcatcagcgacaagtcgcaccgcatcgcccgggactacggcgtgctcaacga 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 catccccatcatcagcgacaagtcgcaccgcatcgcccgggactacggcgtgctcaacga 400
Query: 851 ggagtccgggatacccttcaggggactcttcatcatcgacgacaaacagaacctcagaca 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggagtccgggatacccttcaggggactcttcatcatcgacgacaaacagaacctcagaca 460
Query: 911 ggtcaccgtcaacgacctgcccgtggggaggtcagtagacgaaacccttcgcctggtgca 970
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggtcaccgtcaacgacttgcccgtggggaggtcagtagacgaaacccttcgcctggtgca 520
Query: 971 ggcgttccagttcactgacaagcacggcgaagtgtgtccggccaactggaggccgggtgc 1030
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ggcgttccagtttactgacaagcacggcgaagtgtgtccggccaactggaggccgggtgc 580
Query: 1031 caagaccatcaaacctgacagcaaggctgcccaggagtacttcggagacgtcaactaaac 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caagaccatcaaacctgacagcaaggctgcccaggagtacttcggagacgtcaactaaac 640
Query: 1091 gctcat--tataataaccagttgtagccggccacaaccggctataccaccataacccggc 1148
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 641 gctcattatataataaccagttgtagccggccacaaccggctataccaccataacccgtc 700
Query: 1149 tacacctagccaaataatggaaatagttaatttatgaacccttcagtatgtgataattgt 1208
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 701 tacacctagccatttaatggaaatagttnatttatgaacccttcagtatgtgataattgt 760
Query: 1209 ttgtatgta 1217
|||||||||
Sbjct: 761 ttgtatgta 769
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 167,443
Number of extensions: 3233
Number of successful extensions: 3233
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3232
Number of HSP's successfully gapped: 1
Length of query: 1588
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1571
Effective length of database: 8,119,229
Effective search space: 12755308759
Effective search space used: 12755308759
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)