BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03744 (UTR included)
(2776 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A1G11 1536 0.0
BF01055A2G01 113 2e-24
>BF01009A1G11
Length = 832
Score = 1536 bits (775), Expect = 0.0
Identities = 817/832 (98%)
Strand = Plus / Plus
Query: 1298 gtgtaagatgcacatgaagagggccgcgctacggggatacgagcacgcgcacagagacgc 1357
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1 gtgtaagatgcacatgaagagggccgcgctannnggatacgagcacgcacacagagacgc 60
Query: 1358 ccgcggatacactgcccgtttccctcctcgctacgaggccgctcgtcttatggagtccag 1417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgcggatacactgcccgtttccctcctcgctacgaggccgctcgtcttatggagtccag 120
Query: 1418 cgtcaccgccagtccggtccggagtctccacctgggttcaccaacagctggtcccagtag 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtcaccgccagtccggtccggagtctccacctgggttcaccaacagctggtcccagtag 180
Query: 1478 ccctccaggtcccgcaccgtccagggctttggcggcattatctgctgcactatgttcgcg 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccctccaggtcccgcaccgtccagggctttggcggcattatctgctgcactatgttcgcg 240
Query: 1538 gtaccgacaggtgccgactcaatgctgtgaagtggaaatgagggacataacgatgccgca 1597
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 241 gtaccgacaggtgccgactcaatgctgtgaagtggaaatgagggatataacgatgcctca 300
Query: 1598 atcatccgtgacctcgagtccaccagagcgacccttgacccttcagctcggccggttcca 1657
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 301 atcatccgtgacctcgagtccaccagagcgacccttgacccttcaactcggcaggttcca 360
Query: 1658 cttcaacataccaaggttccgcaacgagaggcccgacactcctgacataacggaaatcaa 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttcaacataccaaggttccgcaacgagaggcccgacactcctgacataacggaaatcaa 420
Query: 1718 tatagaggacctagagttcataaggatgccgtccaacgagacctacaccctcaacggcag 1777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatagaggacctagagttcataaggatgccgtccaacgagacctacaccctcaacggcag 480
Query: 1778 gacgatcaggcttttcgggggcaatttccaaaactaccctctaataaaccggccgccccc 1837
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gacgatcaggcttttcgggggaaatttccaaaactaccctctaataaaccggccgccccc 540
Query: 1838 ctacaatgaggccatgaggcacaaattcggcccaccgccagaatatttaagccacgaggt 1897
|||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 541 ctacaacgaggccatgagacacaaattcggcccaccgccagaatacttaagccacgaggt 600
Query: 1898 cctcaacaacgacagcgacgaagacaacagtaatatagaaatgccgccgtgctacgaaga 1957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cctcaacaacgacagcgacgaagacaacagtaatatagaaatgccgccgtgctacgaaga 660
Query: 1958 cctggcgagcgggctcggctctaattaccaacccgccaacgaaaatgacagcaatctgtt 2017
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cctggcgagcgggctcggatctaattaccaacccgccaacgaaaatgacagcaatctgtt 720
Query: 2018 cgacactagaagcctcgtgacggaccaggagacggattctcatgtaacctgcttagagga 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgacactagaagcctcgtgacggaccaggagacggattctcatgtaacctgcttagagga 780
Query: 2078 gttaccgcctaatatgaacaataacatagagcacgcagcctcgtacatatca 2129
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 781 gttaccgcctaatatgaataataacatagagcacgcagcctcgtacatatca 832
>BF01055A2G01
Length = 792
Score = 113 bits (57), Expect = 2e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 2703 tatggcggtgacgttttggacccggtccctataaacgggggactgcccaagtgattttct 2762
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 3 tatggcggtgacgttttggacccggtccctatnnncgggggactacccaagtgattttct 62
Query: 2763 taccagctattggt 2776
|||||| |||||||
Sbjct: 63 taccagttattggt 76
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 398,843
Number of extensions: 25599
Number of successful extensions: 25599
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 25599
Number of HSP's successfully gapped: 2
Length of query: 2776
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2759
Effective length of database: 8,119,229
Effective search space: 22400952811
Effective search space used: 22400952811
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)