BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03749 (UTR included)
(1161 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 210 4e-54
BF01011A1H06 84 6e-16
>BF14_729_C3
Length = 2041
Score = 210 bits (106), Expect = 4e-54
Identities = 194/222 (87%), Gaps = 2/222 (0%)
Strand = Plus / Plus
Query: 942 gagaagatggctggaatctaccaaacacctgagaaccccttcttaaaaatggaaaatccc 1001
|||||||||||||||||||| |||||||||| || ||| ||||||||||| ||||||||
Sbjct: 1393 gagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatccc 1452
Query: 1002 atgtccgtgaccacacctcaagaccccgggacaccgtaagcgcattctatcagcatccag 1061
||||||| |||||||| || |||| | |||||||| |||||||||| | ||||||||
Sbjct: 1453 atgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatccag 1512
Query: 1062 agcggtactccagaaaa-taagaaatcgatggcggtagatgataaataacaaggaccgac 1120
|||||||| ||| | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1513 agcggtacgccannnnattaagaaatcgatggcggtagatgataaataacaaggaccaac 1572
Query: 1121 tgacaaacattcacatcttgtc-gcccgtgatcacggttgct 1161
||||| ||||||||| || ||| |||||||||||||||||||
Sbjct: 1573 tgacagacattcacacctcgtctgcccgtgatcacggttgct 1614
>BF01011A1H06
Length = 739
Score = 83.8 bits (42), Expect = 6e-16
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1082 gaaatcgatggcggtagatgataaataacaaggaccgactgacaaacattcacatcttgt 1141
|||||||||||||| || |||| ||||||||||||| ||||||| ||| |||||||| ||
Sbjct: 406 gaaatcgatggcggcagttgatgaataacaaggaccaactgacagacactcacatctcgt 465
Query: 1142 c-gcccgtgatcacggtt 1158
| ||||||||||||||||
Sbjct: 466 ctgcccgtgatcacggtt 483
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 150,434
Number of extensions: 3874
Number of successful extensions: 3874
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3871
Number of HSP's successfully gapped: 2
Length of query: 1161
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1144
Effective length of database: 8,119,229
Effective search space: 9288397976
Effective search space used: 9288397976
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)