BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03765 (UTR included)
(1942 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1F04 1086 0.0
>BF01040A1F04
Length = 589
Score = 1086 bits (548), Expect = 0.0
Identities = 572/580 (98%)
Strand = Plus / Plus
Query: 263 tgcgggtgacgataatatcaacatctatgtatatagcaattgaagtggattttgttatct 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tgcgggtgacgataatatcaacatctatgtatatagcaattgaagtggattttgttatct 69
Query: 323 tttatttctagattacagctactagtgtattggattcaatattaaactgtctcttttatg 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tttatttctagattacagctactagtgtattggattcaatattaaactgtctcttttatg 129
Query: 383 gtttattcgaatttttgtgtaacgagaaataatatttaatttagtttaaagaattttaag 442
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 130 gtttattagaatttttgtgtaacgagaaataatatttaatttagtttaaagagttttaag 189
Query: 443 acttttatacagtttaaacttcaatcttttagcttacaagttacaacgtagaataaaaat 502
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 acctttatacagtttaaacttcaatcttttagcttacaagttacaacgtagaataaaaat 249
Query: 503 ggcgaaagcgaaggttaaccagaaaatgggaccagttgttgagttgcctgaatgtccaat 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggcgaaagcgaaggttaaccagaaaatgggaccagttgttgagttgcctgaatgtccaat 309
Query: 563 ttgcttggacaccatgtcagctccaatattccaatgtcaatcagggcacagtctctgcag 622
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 310 ttgcttggacaccatgtcagctccaatattccaatgtcaatcaggtcacagtctctgcaa 369
Query: 623 ctcttgtactaaagcgttgatgcctcctatatgtccattgtgccgtcaagcaatgactca 682
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 370 ctcttgtactaaagcgttgatgcctcctatatgtcctttgtgccgtcaagcaatgactca 429
Query: 683 agtgagaaattggcagcttgaggatttgttattaaaggctactatgaactgtccaaatag 742
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 430 agtgagaaattggcagcttgaggatttgttattgaaggctactatgaactgtccgaatag 489
Query: 743 gatcataggttgtgcttatacaactgttgcatcaaatatggaaaaccacatcaaagaatg 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gatcataggttgtgcttatacaactgttgcatcaaatatggaaaaccacatcaaagaatg 549
Query: 803 tatttatcgagagatgatttgccctcttcatgtatttggc 842
||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tatttatcgagagatgatttgccctcttcatgtatttggc 589
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 306,308
Number of extensions: 8111
Number of successful extensions: 8111
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8111
Number of HSP's successfully gapped: 1
Length of query: 1942
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1925
Effective length of database: 8,119,229
Effective search space: 15629515825
Effective search space used: 15629515825
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)