BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03768 (UTR included)
(2581 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3403_C1 2153 0.0
>BF14_3403_C1
Length = 1210
Score = 2153 bits (1086), Expect = 0.0
Identities = 1135/1151 (98%), Gaps = 4/1151 (0%)
Strand = Plus / Plus
Query: 1128 tactgcatactaggattgcctgtaatattttttacagcttgtctatggatacctgaatct 1187
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tactgcatactaggattgcctgtaatattttttatagcttgtctatggatacctgaatct 60
Query: 1188 ccatattattatttgaagaaaggcaaagtggaacaagcgaggcgagttctcataagatta 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccatattattatttgaagaaaggcaaagtggaacaagcgaggcgagttctcataagatta 120
Query: 1248 aaaggggaagagaacgcagagatcgaattagagtctttaaaggcagatgtgaataaggaa 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaggggaagagaacgcagagatcgaattagagtctttaaaggcagatgtgaataaggaa 180
Query: 1308 atgcgacattctgggacggtttgcgaattatttactgggagacaatatagacgtccgctc 1367
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 181 atgcgacattctgggacggtttgcgaattatttactgggagacaacatagacgtccgctc 240
Query: 1368 gtaatagcattgggtttgaaggtaacccagataatgacgggtacacttactatacagcag 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtaatagcattgggtttgaaggtaacccagataatgacgggtacacttactatacagcag 300
Query: 1428 tatttagggcgtatcatgcaagatgcaaacatcaatatgaaattatcaactatactggtt 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatttagggcgtatcatgcaagatgcaaacatcaatatgaaattatcaactatactggtt 360
Query: 1488 atttttggtatagtcaagtttgttgttggtataatgtcttccattttggtagacagagtt 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atttttggtatagtcaagtttgttgttggtataatgtcttccattttggtagacagagtt 420
Query: 1548 ggacggagaccgcttttgatatattcatatctcgctttcggcctttgtgtggcaacagct 1607
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 ggacggagaccgcttttgatatattcatatctcgctttcggcctctgtgtggcaacagct 480
Query: 1608 ggttcatacttttttttattggatgtcgtttctttaaacccatcagttctcagaccatac 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggttcatacttttttttattggatgtcgtttctttaaacccatcagttctcagaccatac 540
Query: 1668 ggtgctgtaccgtttgtggctataattctttgtagtgtagtgtccactttaggtttcaat 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggtgctgtaccgtttgtggctataattctttgtagtgtagtgtccactttaggtttcaat 600
Query: 1728 tcgattataagcatcatatcggcggaagttttccccttaaacgtcaaaccagtagccatg 1787
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcgattataagcatcatatcagcggaagttttccccttaaacgtcaaaccagtagccatg 660
Query: 1788 acaacgcttaatgttttcggaggtttcgccggtttctccgtggctaaaacgtatcaggcc 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acaacgcttaatgttttcggaggtttcgccggtttctccgtggctaaaacgtatcaggcc 720
Query: 1848 gtgaagaatatatctggtttgtgcggtgcgttctggatgttctctttgatagcgttttct 1907
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 721 gtgaagaatatatccggtttgtgcggtgcgttctggatgttctctttgatagcgttctct 780
Query: 1908 ggtgctgtattttcatatttcgtcgtaccagaaacgagagggaagagtttgcgtgagatt 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggtgctgtattttcatatttcgtcgtaccagaaacgagagggaagagtttgcgtgagatt 840
Query: 1968 caagaaatctttcaaattaatgataacattgaaaccaagatcgaagagacgcttttatca 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 caagaaatctttcaaattaatgataacattgaaaccaagatcgaagagacgcttttatca 900
Query: 2028 aaacaaaatggcggcacagagctcaacgtactgaataaagagtccagcttgtaggaatgt 2087
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 901 aaacaaaatggcggcacagagctcaacgtactgaataaagagtccaacttgtaggaatgt 960
Query: 2088 taataaataaggctttagactttaaaatttaagactgaaaccttttatacatgttcttta 2147
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 961 t----aataaggctttagactttaatatttaagactgaaaccttttatacatgttcttta 1016
Query: 2148 atttataagtacgataacagacttgtccgttaagtttaaaaaacgtctgaaggtatattc 2207
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 atatataagtacgataacagacttgtccgttaagtttaaaaaacgtctgaaggtatattc 1076
Query: 2208 agaaaactcgaagaatattccctatattctaggcttatgaaacataaatatcctataaat 2267
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 1077 agaaaactcgaagaatattccctatattctaggcttatgaaacataaatgtcccataaat 1136
Query: 2268 atatatatata 2278
||||||||||
Sbjct: 1137 ttatatatata 1147
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 2261 tataaatatatatatataacttaagcttgaaagtgtacttatatattta 2309
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 tatatatatatatatataacttaagcttgaaagtgtacttatatattta 1210
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,744
Number of extensions: 10944
Number of successful extensions: 10944
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10942
Number of HSP's successfully gapped: 2
Length of query: 2581
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2564
Effective length of database: 8,119,229
Effective search space: 20817703156
Effective search space used: 20817703156
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)