BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03807 (UTR included)
(1318 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A2D05 145 2e-34
BF14_736_C1 74 6e-13
BF01011A1B08 70 1e-11
>BF01033A2D05
Length = 853
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 1246 tttgggctgaactctgtgcgtgtcgacacagtcgatgggcatctttatcatctctatgtt 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tttgggctgaactctgtgcgtgtcgacacagtcgatgggcatctttatcatctctatgtt 55
Query: 1306 gtatttgtagccg 1318
|||||||||||||
Sbjct: 54 gtatttgtagccg 42
>BF14_736_C1
Length = 796
Score = 73.8 bits (37), Expect = 6e-13
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 65 ggaaagggcaatcggttctctcagtcaccagtcgaaacacaaccattaaagactacttca 124
||||||||||| ||| ||||||| ||| | |||||| || ||| ||||||||||||||
Sbjct: 733 ggaaagggcaaccggctctctcactcattggacgaaacgcagccactaaagactacttca 674
Query: 125 ctccaaactcctgtgagagggtggtacttcccc 157
| || | || |||||||||||||||||||||||
Sbjct: 673 cgccgatcttctgtgagagggtggtacttcccc 641
>BF01011A1B08
Length = 853
Score = 69.9 bits (35), Expect = 1e-11
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 63 agggaaagggcaatcggttctctcagtcaccagtcgaaacacaaccattaaagactactt 122
||||||||||||| ||| | ||||| ||| ||| |||||| || |||||| ||||||||
Sbjct: 27 agggaaagggcaaacggctttctcattcatcagacgaaacgcagtcattaatgactactt 86
Query: 123 cactccaaactcctgtgagagggtggtacttcccccatcgagc 165
||| || | || |||||||||| |||||||| |||| ||||||
Sbjct: 87 cacgccgatcttctgtgagaggatggtacttgccccgtcgagc 129
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 174,148
Number of extensions: 4612
Number of successful extensions: 4612
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4612
Number of HSP's successfully gapped: 3
Length of query: 1318
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1301
Effective length of database: 8,119,229
Effective search space: 10563116929
Effective search space used: 10563116929
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)