BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03823 (UTR included)
(2227 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A1D04 1130 0.0
>BF01034A1D04
Length = 796
Score = 1130 bits (570), Expect = 0.0
Identities = 588/594 (98%)
Strand = Plus / Plus
Query: 515 gtttgctgttgttgatgcgaacgattatttatcaaaaaaacaggcttcggatcctgaatt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttgctgttgttgatgcgaacgattatttatcaaaaaaacaggcttcggatcctgaatt 60
Query: 575 agcctcagattgggccaagctagaagaactatataataagaaattatggcaccaacttac 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcctcagattgggccaagctagaagaactatataataagaaattatggcaccaacttac 120
Query: 635 attaaaacttcaagaattcgtaaagcacccctcattgcagagcggcgacaacttgatcca 694
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaaaacttcaagaatttgtaaagcacccctcattgcagagcggcgacaacttgatcca 180
Query: 695 gctttacaacaacttcctaacgatctttgagaataaaatcaatccactgtccctggtaga 754
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 gctttacaacaacttcctaacgatatttgagaataaaatcaatccactgtccctggtaga 240
Query: 755 gatagtcgcacacattgtaactcagtacgcagacaagagagaagccgtggcattcctgga 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatagtcgcacacattgtaactcagtacgcagacaagagagaagccgtggcattcctgga 300
Query: 815 aaaaattgaagctaaggtcaaaatgaatgccgaggcgctcgctctgtgtaaggtcctgca 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaaattgaagctaaggtcaaaatgaatgccgaggcgctcgctctgtgtaaggtcctgca 360
Query: 875 aggccaaatctatctggagcatctgaacgaccttgatgctacggagaaaatcatagacgt 934
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 gggccaaatctatctggagcatctgaacgaccttgatgctacggaaaaaatcatagacgt 420
Query: 935 cctcgagaataccttggaagatgccgacggagtcacaccggtacatggaaggttttataa 994
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 421 cctcgagaataccttggaagatgccgacggagtcacaccggtacacggaaggttttataa 480
Query: 995 actggcttcggaatattacagagttcgtggacccatggcccgttactacgtggcggcgct 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actggcttcggaatattacagagttcgtggacccatggcccgttactacgtggcggcgct 540
Query: 1055 ccgttacgtgggctgtgcgggtggaggggcgaacctcccattgcacgagcgtcg 1108
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccgttacgtgggttgtgcgggtggaggggcgaacctcccattgcacgagcgtcg 594
Score = 305 bits (154), Expect = 2e-82
Identities = 160/162 (98%)
Strand = Plus / Plus
Query: 1149 agagttcgtggccccatggcccgttactacgtggcggcgctccgttacgtgggttgtgcg 1208
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agagttcgtggacccatggcccgttactacgtggcggcgctccgttacgtgggttgtgcg 559
Query: 1209 ggtggaggggctaacctcccattgcacgagcgtcgcgccgcagccctacgactggcgctg 1268
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggtggaggggcgaacctcccattgcacgagcgtcgcgccgcagccctacgactggcgctg 619
Query: 1269 gcagccgtacttgcacccaccgtctacgatctgggagagctg 1310
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcagccgtacttgcacccaccgtctacgatctgggagagctg 661
Score = 131 bits (66), Expect = 5e-30
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 1310 ggcagtggcagcaggagatgtggtcgcctttgagaagatacgagcacaatctcctcacca 1369
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ggcagtggcagcgggagatgtggtcgcctttgagaagatacgagcacaatctcctcacca 786
Query: 1370 agaacttcat 1379
||||||||||
Sbjct: 787 agaacttcat 796
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 229,785
Number of extensions: 4169
Number of successful extensions: 4169
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4169
Number of HSP's successfully gapped: 3
Length of query: 2227
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2210
Effective length of database: 8,119,229
Effective search space: 17943496090
Effective search space used: 17943496090
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)