BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03824 (UTR included)
(2365 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1D01 1035 0.0
BF01034A1E08 317 4e-86
>BF01040A1D01
Length = 762
Score = 1035 bits (522), Expect = 0.0
Identities = 531/534 (99%)
Strand = Plus / Plus
Query: 310 gtgcccaaagaaagctgtcttatgttccagtattgtaaatacagtctagtcgtacagtat 369
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gtgcccaaagaaaactgtcttatgttccagtattgtaaatacagtctagtcgtacagtat 188
Query: 370 ctatgtacttatgttaagtaaataatctgtgatataaaaccttattggtggacttaatac 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctatgtacttatgttaagtaaataatctgtgatataaaaccttattggtggacttaatac 248
Query: 430 tttataaggactgaataagtattggccaaagagtattatgtattatatatattaaaaagt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tttataaggactgaataagtattggccaaagagtattatgtattatatatattaaaaagt 308
Query: 490 taagtgataacatggcactcccaccgcagcagttctgtgtgaggtggaactcctatcata 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 taagtgataacatggcactcccaccgcagcagttctgtgtgaggtggaactcctatcata 368
Query: 550 ctaatttacaggcagtattccctcgcctattactaacggagcagtttgctgacgtcacat 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctaatttacaggcagtattccctcgcctattactaacggagcagtttgctgacgtcacat 428
Query: 610 tagcctgcgaatcaaaacagttgagatgtcacaagttggtgctgtcagcttgttcagcgt 669
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 429 tagcctgcgaatcaaaacagttgagatgtcacaagttggtgctgtcagcatgttcagcgt 488
Query: 670 acctggaacggctcctgctgcagaacccctgcaagcatcccatcgtgctcatgagggaca 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acctggaacggctcctgctgcagaacccctgcaagcatcccatcgtgctcatgagggaca 548
Query: 730 tgcgattcagtgaaatgcaagccctagtggacttcatgtacaagggggaagtgaacgtca 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgcgattcagtgaaatgcaagccctagtggacttcatgtacaagggggaagtgaacgtca 608
Query: 790 cgcaggaggagctcccgagcctgttgaaatccgccgaagccctacagataagag 843
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 609 cgcaggaggagctcccgagccttttgaaatccgccgaagccctacagataagag 662
>BF01034A1E08
Length = 847
Score = 317 bits (160), Expect = 4e-86
Identities = 160/160 (100%)
Strand = Plus / Plus
Query: 858 ccgaagaagagcaaatcagaagaaagggaaaagacggacgtcaaagaagagacggtggag 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccgaagaagagcaaatcagaagaaagggaaaagacggacgtcaaagaagagacggtggag 60
Query: 918 gaagacggcctctactacggagagctggagaacgagcacatggactataacgaggacgag 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagacggcctctactacggagagctggagaacgagcacatggactataacgaggacgag 120
Query: 978 gaatcaggcaagccgagtagtagtttaggacagacgtcag 1017
||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaatcaggcaagccgagtagtagtttaggacagacgtcag 160
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,069
Number of extensions: 12207
Number of successful extensions: 12207
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12207
Number of HSP's successfully gapped: 2
Length of query: 2365
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2348
Effective length of database: 8,119,229
Effective search space: 19063949692
Effective search space used: 19063949692
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)