BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03830 (UTR included)
(2767 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1E05 977 0.0
>BF01058B1E05
Length = 719
Score = 977 bits (493), Expect = 0.0
Identities = 506/509 (99%), Gaps = 1/509 (0%)
Strand = Plus / Plus
Query: 1198 aggtccatcattctacggtggctatatcaaagcctcaggctaagagcaatgaggcagctc 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aggtccatcattctacggtggctatatcaaagcctcaggctaagagcaatgaggcagctc 270
Query: 1258 aaagggagatcgaagaggccatgtgcagagttaaggaagcccagaacttgatatcggctg 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaagggagatcgaagaggccatgtgcagagttaaggaagcccagaacttgatatcggctg 330
Query: 1318 ccatcgaccccgttattggattgttgtctaaagacaaaaggactcgttcccggtcccggt 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ccatcgaccccgttattggattgttgtctaaagacaaaaggactcgttcccggtcccggt 390
Query: 1378 cccgccgccgctcccggtcccggtctcgtcgttcccggtcccgtcaccgctctaagcgat 1437
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 391 cccgccgccgctcccggtcccggtctcgtcgttcccggtcccgtcaccgctccaagcgat 450
Query: 1438 cccgctcacggtccagacatcgctcccggagatcacgctcgaggcaccgacaccgcacta 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cccgctcacggtccagacatcgctcccggagatcacgctcgaggcaccgacaccgcacta 510
Query: 1498 ggtctcgttcccgtcaccgaagctcacggcgctccaggtccagatccagacaccgcagct 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggtctcgttcccgtcaccgaagctcacggcgctccaggtccagatccagacaccgcagct 570
Query: 1558 cgagatccaaacgagagaagtcgaaagaacgcgatagaaaagacaagaaagacatcggtg 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cgagatccaaacgagagaagtcgaaagaacgcgatagaaaagacaagaaagacatcggtg 630
Query: 1618 ataaggaaaagagagacagtgataagacgaagtcaccgcagaaagacgtgggtagggacg 1677
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 631 ataaggaaaagagagacagtgataagacgaagtcaccgcaaaaagacgtgggtagggacg 690
Query: 1678 g-aaaagacgagctcaagattgacatcag 1705
| |||||||||||||||||||||||||||
Sbjct: 691 gaaaaagacgagctcaagattgacatcag 719
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,759
Number of extensions: 7719
Number of successful extensions: 7719
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7712
Number of HSP's successfully gapped: 1
Length of query: 2767
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2750
Effective length of database: 8,119,229
Effective search space: 22327879750
Effective search space used: 22327879750
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)