BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03859 (UTR included)
(2038 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2354_C1 1556 0.0
>BF14_2354_C1
Length = 971
Score = 1556 bits (785), Expect = 0.0
Identities = 854/874 (97%), Gaps = 6/874 (0%)
Strand = Plus / Plus
Query: 1171 ttatatcaaaaactttccacactgtgttcattagagatttacctcaattgtccattgtgt 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttatatcaaaaactttccacactgtgttcattagagatttacctcaattgtccattgtgt 60
Query: 1231 tacatagatcacagatacgtaggttcataacattgattgatactctgtatgacaatagag 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacatagatcacagatacgtaggttcataacattgattgatactctgtatgacaatagag 120
Query: 1291 tgagggttgttatagctgcggattgtgaaccaaagaatcttttcaagttggatgatgtga 1350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagggttgttatagctgcggattgtgaaccaaagaatcttttcaagttggatgatgtga 180
Query: 1351 aagacagtattggtgatgctgatagggctttgatggatgatcttaaaatcactaaagatt 1410
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagacggtattggtgatgctgatagggctttgatggatgatcttaaaatcactaaagatt 240
Query: 1411 cggacgatgcaaaagccgcaatatttaccggtgaagaagaaatgtttgcatgcgaacggt 1470
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 241 cggacgatgcaaaagccgcaatatttacaggtgaagaagaaatgtttgcatgcgaacggt 300
Query: 1471 gcctgtctagaattatggaaatgcaaactgatgagtattggaaaaaatggagtaacgaag 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcctgtctagaattatggaaatgcaaactgatgagtattggaaaaaatggagtaacgaag 360
Query: 1531 tcaattaatgacatttagttttgacaatcacagtatgacttatacgtagacatg-ttttt 1589
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 tcaattaatgacatttagttttgacaatcacagtatgacttatacgtagacatgtttttt 420
Query: 1590 ttatgttccatttcgcgaattcaatttatatgaccaccgtaatgacgtgtagttaaaatt 1649
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttatgttccatttcgcggattcaatttatatgaccaccgtaatgacgtgtagttaaaatt 480
Query: 1650 aaactatttatgttttataattttaaaggtctagtattcaatgcgcac-aaaaaatgaat 1708
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 aaactatttatgttttataattttaaaggtctagtattcaatgcgcacaaaaaaatgaat 540
Query: 1709 tttgattgaaatttatattagtatatttataatttaatattgtgcaataataataaacta 1768
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttgattgaaatttatatcagtatatttataatttaatattgtgcaataataataaacta 600
Query: 1769 aaaacttttttctgttagtattttcagtcgcttgatactaggaagaaattaaaaatatac 1828
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaactttttgctgttagtattttcagtcgcttgatactaggaagaaattaaaaatatac 660
Query: 1829 atatttttcaagtgactgttgttcagtcgatttgtttctaaatattttatacttagtgat 1888
||||||||||| |||||| | |||||||||||||||||||||||| |||||||||||||
Sbjct: 661 atatttttcaaacgactgtcgctcagtcgatttgtttctaaatattctatacttagtgat 720
Query: 1889 ataaacgctcaatttctcgtacaaattctttactgttgtgttttgataatacatga---- 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ataaacgctcaatttctcgtacaaattctttactgttgtgttttgataatacatgatatg 780
Query: 1945 taagtgaaaaatatccgttaccaatttatatattttaataagataacattgtgcattcat 2004
||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 781 taagtgaaaaatatccgttaccaatttatatatttgaataagatgacattgtgtattcat 840
Query: 2005 aatttattcgaagtttaagtgccttttttggata 2038
||||||||| ||||||||||||||||||||||||
Sbjct: 841 aatttattcaaagtttaagtgccttttttggata 874
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,394
Number of extensions: 5957
Number of successful extensions: 5957
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5954
Number of HSP's successfully gapped: 1
Length of query: 2038
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2021
Effective length of database: 8,119,229
Effective search space: 16408961809
Effective search space used: 16408961809
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)