BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03875 (UTR included)
(3556 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 280 1e-74
BF01060B1D11 262 3e-69
BF14_335_C2 109 3e-23
BF01055B2A04 76 4e-13
BF01043B1E03 76 4e-13
BF01031B2E06 76 4e-13
BF01056B1D01 74 2e-12
>BF01047B2H03
Length = 758
Score = 280 bits (141), Expect = 1e-74
Identities = 301/351 (85%), Gaps = 5/351 (1%)
Strand = Plus / Minus
Query: 1541 gagtctaaaaaggccatcggagctctataaacaccagagagtttccaagggatatatcct 1600
|||||||||||||||||||||||||||||||||| |||||||||||| || ||||||
Sbjct: 755 gagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatatccc 696
Query: 1601 gaggaaatcccatgatgacattgttacatcgctcccaaaagacaaaggtgccccagagct 1660
| ||||| ||||| |||| | ||||||| ||| ||||| | | || |||||| || ||
Sbjct: 695 ggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctgaact 636
Query: 1661 agagtcaagacttcaattccataagcagtttatgatacaagcacaaaggaacaa-agtag 1719
| |||||||||||||||||||||| |||||||||||| ||||||||| ||| | |||||
Sbjct: 635 aaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagagtag 576
Query: 1720 ggttagaatcaaataagaaattccaagatacggatatattgaagtcttttattcggcaag 1779
| |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gattaggatcaaggaagaaggcccaagatacggatatattgaagtcttttattcggcaag 516
Query: 1780 atgagaatgataaatataagatccatgcaatgagtttagagatgcagaacgaggggttag 1839
| ||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||
Sbjct: 515 acgagaatgatggatataacatccatgcaatgagtttagatatgcagaacgagtggttag 456
Query: 1840 acgtag-gagatttttacgtcccattagcattaaaatggcgcaccttaatt 1889
|| ||| |||| || | | ||||||||| ||||||||||||||||||||
Sbjct: 455 acatagagaga---ttccattccattagcaataaaatggcgcaccttaatt 408
>BF01060B1D11
Length = 799
Score = 262 bits (132), Expect = 3e-69
Identities = 367/438 (83%), Gaps = 8/438 (1%)
Strand = Plus / Minus
Query: 1457 tcataaagatgttgaatttgtgactcgggctcgcggtacgga-tgattcatcagctttat 1515
|||||||| ||||||||||||| ||| |||||||| | || |||| | || ||||||
Sbjct: 668 tcataaag-tgttgaatttgtggctccggctcgcgacatcgactgatacgtcggctttaa 610
Query: 1516 tcagggatcacaatagttttgggacgagtctaaaaaggccatcggagctctataaacacc 1575
| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 609 ttagggatcgcaatagttttgggatgagtctaaaaaggccatcggagctctataaacact 550
Query: 1576 agagagtttccaagggatatatcctgaggaaatcccatgatgacattgttacatcgctcc 1635
|||||||||||| || |||||| | ||||| ||||| |||| | ||||||| ||||
Sbjct: 549 taagagtttccaagagacatatcccggggaaagcccataatgatgtcattacatcactcc 490
Query: 1636 caaaagacaaaggtgccccagagctagagtca-agacttcaattccataagcagtttatg 1694
||||| | || || |||||| ||| |||| |||||||||||||| || |||||||||
Sbjct: 489 caaaaaccggagatggcccagaactaaagtctgagacttcaattccacaaacagtttatg 430
Query: 1695 atacaagcacaaaggaacaa-agtagggttagaatcaaataagaaattccaagatacgga 1753
||| ||||||||| ||| | |||||| |||| ||||| ||||| ||||||| |||
Sbjct: 429 ataggagcacaaagtaacgagagtaggattaggatcaaggaagaaggctcaagatatgga 370
Query: 1754 tatattgaagtcttttattcggcaagatgagaatgataaatataagatccatgcaatgag 1813
||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||||| |
Sbjct: 369 tatattgaagtattttattcagcaagacgagaatgatggatataagatccatgcaatgcg 310
Query: 1814 tttagagatgcagaacgaggggttagacgtag-gagatttttacgtcccattagcattaa 1872
||||||||||||||||||| |||||||| ||| |||| || | | ||||||||| |||
Sbjct: 309 tttagagatgcagaacgagtggttagacatagagaga---ttccattccattagcaataa 253
Query: 1873 aatggcgcaccttaattt 1890
||||||||||||||||||
Sbjct: 252 aatggcgcaccttaattt 235
>BF14_335_C2
Length = 1827
Score = 109 bits (55), Expect = 3e-23
Identities = 94/107 (87%)
Strand = Plus / Minus
Query: 2078 gagaggtataacggcaaaatctctctacaacctactaaaagacttgggcctgtccagaac 2137
|||||||||||| || ||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 2138 taatatcaattcatacctggaacgtacttctatggcagctctagtag 2184
||| | || ||||| | | ||||||||||| | | ||||||||||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtag 1001
>BF01055B2A04
Length = 830
Score = 75.8 bits (38), Expect = 4e-13
Identities = 62/69 (89%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 2062 ttgtagaagtggaagcgagaggtataacggcaaaatctctctacaacctactaaaagact 2121
||||| || ||||||||| ||||||||| || |||||||| ||||||||||||||||||
Sbjct: 433 ttgtacaattggaagcgaaaggtataacagctaaatctct--acaacctactaaaagact 376
Query: 2122 tgggcctgt 2130
|||||||||
Sbjct: 375 tgggcctgt 367
>BF01043B1E03
Length = 830
Score = 75.8 bits (38), Expect = 4e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 2096 atctctctacaacctactaaaagacttgggcctgtccagaactaatatcaattcatacct 2155
|||||||||||||||||| ||| ||||| ||||| |||||||||| ||||| |||| | |
Sbjct: 229 atctctctacaacctactgaaacacttgagcctgcccagaactaacatcaaatcattctt 288
Query: 2156 ggaacgtact 2165
||||||||||
Sbjct: 289 ggaacgtact 298
>BF01031B2E06
Length = 707
Score = 75.8 bits (38), Expect = 4e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 2053 atttgtacgttgtagaagtggaagcgagaggtataacggcaaaatctctctacaacctac 2112
||||||||| |||||||||| |||||| | | ||| || ||||||||| |||||||||
Sbjct: 513 atttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaatctctccacaacctac 572
Query: 2113 taaaagacttgggcctgtccagaactaatatcaa 2146
||||| |||||||||||||||| |||| |||||
Sbjct: 573 taaaaaccttgggcctgtccagatctaacatcaa 606
>BF01056B1D01
Length = 838
Score = 73.8 bits (37), Expect = 2e-12
Identities = 107/129 (82%), Gaps = 6/129 (4%)
Strand = Plus / Minus
Query: 1843 taggagatttttacgtcccattagcattaaaatggcgcaccttaa-tttatgattggtcg 1901
|||||||||||| ||||||| ||||| ||| | || ||| |||| |||||||||||| |
Sbjct: 192 taggagatttttgcgtcccaatagcacaaaagtagcccactttaaatttatgattggttg 133
Query: 1902 ccagcattgctaaa-----attttatctcaatgagttccaaatgacgctcccagatcaga 1956
|||||| ||||||| ||||||||| ||| |||||||||||| || ||| ||||||
Sbjct: 132 ccagcactgctaaattaaaattttatcttgatgcgttccaaatgactcttccaaatcaga 73
Query: 1957 gtaatttag 1965
|||||||||
Sbjct: 72 gtaatttag 64
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 459,842
Number of extensions: 10107
Number of successful extensions: 10107
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 10103
Number of HSP's successfully gapped: 8
Length of query: 3556
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3538
Effective length of database: 8,109,745
Effective search space: 28692277810
Effective search space used: 28692277810
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)