BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03886 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B1A11 129 1e-29
BF01018B2A11 125 2e-28
BF01030A2C06 117 5e-26
BF01056B1D01 96 2e-19
BF01037B1H08 86 2e-16
>BF01016B1A11
Length = 786
Score = 129 bits (65), Expect = 1e-29
Identities = 126/144 (87%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 113 taaattaacttttaaatcatttaaatcgggcgtattatttaaaagttatcataatataag 172
||||||| |||||||||||||||||| |||||| |||| ||||||||||| |||||||
Sbjct: 166 taaattactttttaaatcatttaaatcaggcgtaccatttgaaagttatcattatataag 107
Query: 173 tttaataatcctcaaaatgaaataggctatgttatttattattttgtaaagagcctgtgc 232
|||| |||| |||||||| ||||||||||| ||| |||| |||| ||||| ||| ||||
Sbjct: 106 tttagtaattctcaaaattaaataggctatttta--tatt-ttttctaaagtgcccgtgc 50
Query: 233 gaagccggggctgggacctagtta 256
|||||||||||||| |||||||||
Sbjct: 49 gaagccggggctggtacctagtta 26
>BF01018B2A11
Length = 733
Score = 125 bits (63), Expect = 2e-28
Identities = 111/127 (87%)
Strand = Plus / Minus
Query: 73 aaaataaattacttcgttttcaagcctacatcagtatcggtaaattaacttttaaatcat 132
||||| ||||||||||||||||||||||||||| | || ||||||| |||||||||||
Sbjct: 550 aaaatgaattacttcgttttcaagcctacatcactttctttaaattactttttaaatcat 491
Query: 133 ttaaatcgggcgtattatttaaaagttatcataatataagtttaataatcctcaaaatga 192
|||||||||||||| ||| |||| ||||||||||||| ||||| ||| |||||||| |
Sbjct: 490 ttaaatcgggcgtaccgtttgaaaggtatcataatataaatttaaaaatgctcaaaatta 431
Query: 193 aataggc 199
|||||||
Sbjct: 430 aataggc 424
>BF01030A2C06
Length = 599
Score = 117 bits (59), Expect = 5e-26
Identities = 109/125 (87%), Gaps = 3/125 (2%)
Strand = Plus / Minus
Query: 86 tcgttttcaagcctacatcagtatcggtaaattaacttttaaatcatttaaatcgggcgt 145
||||||| |||||||||||| |||| |||||||| |||||||||||||||||| |||||
Sbjct: 131 tcgtttttaagcctacatcactatctgtaaattactttttaaatcatttaaatcaggcgt 72
Query: 146 attatttaaaagttatcataatataagtttaa---taatcctcaaaatgaaataggctat 202
| |||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||
Sbjct: 71 accatttgcaagttatcataatataagtttaataataatcctcaaaattaaaaaggctat 12
Query: 203 gttat 207
||||
Sbjct: 11 tttat 7
>BF01056B1D01
Length = 838
Score = 95.6 bits (48), Expect = 2e-19
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 86 tcgttttcaagcctacatcagtatcggtaaattaacttttaaatcatttaaatcgggcgt 145
||||||| |||||||||||| |||| |||||||| ||||||||||||||| || |||||
Sbjct: 449 tcgtttttaagcctacatcactatctgtaaattactttttaaatcatttaagtcaggcgt 390
Query: 146 attatttaaaagttatcataatataagtttaataat 181
| |||| ||||||||||||||||||| |||||||
Sbjct: 389 accatttgcaagttatcataatataagtctaataat 354
>BF01037B1H08
Length = 758
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 1 tttcgaacccgcgccctcacgcatgagaggcggtcctttaacctccaggccaccacgac 59
||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||
Sbjct: 129 tttcgaacccgcgccttcacgtatgagaggcgggcctttaacctccaggccacaacgac 71
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 186,315
Number of extensions: 3665
Number of successful extensions: 3665
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 3663
Number of HSP's successfully gapped: 5
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)