BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03904 (UTR included)
(2776 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2393_C1 1451 0.0
>BF14_2393_C1
Length = 799
Score = 1451 bits (732), Expect = 0.0
Identities = 767/780 (98%), Gaps = 9/780 (1%)
Strand = Plus / Plus
Query: 293 tgtcagtcacattatagtagtgattttgtagctaagaatttctatccgaatttaagtaaa 352
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 tgtcggtcacattatagtagtgattttgtagctaagaatttctatccgaatttaagtaaa 79
Query: 353 tttagatttgtttcatacacccaaagtttattgtaaggtttacttaaaaaacagcgatat 412
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 80 tttagatttgtttcatacacccaaagtttattgtaaggtttacttaaaaaacagcggtat 139
Query: 413 ttgtagtataaggaattacaaggatactgttagttcacaattttattatcacgtgtaaat 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ttgtagtataaggaattacaaggatactgttagttcacaattttattatcacgtgtaaat 199
Query: 473 ataagtcaaaacgttgctgacaaaaaatatggaattgttgcagggcatcgagatgaacgc 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ataagtcaaaacgttgctgacaaaaaatatggaattgttgcagggcatcgagatgaacgc 259
Query: 533 agggatgggggtgccggcttctttgggcgtcgtctgtccgccgagtgcggcgagctcggt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agggatgggggtgccggcttctttgggcgtcgtctgtccgccgagtgcggcgagctcggt 319
Query: 593 ---------gggcgcggtgggagtgatgggcgcgatgggtggcgcttgtccgaccgtgag 643
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 320 gggcgcggtgggcgcggtgggagtgatgggcgcgatgggtggcgcttgcccgaccgtgag 379
Query: 644 cggagacttccacgcggcgcctatctatgacctgttgcaggtcggcgacgtgttcacagg 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cggagacttccacgcggcgcctatctatgacctgttgcaggtcggcgacgtgttcacagg 439
Query: 704 gccgggcgccaagtgttcttcgctgcctgccatccttggcggaaacatgccgcgactgtc 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gccgggcgccaagtgttcttcgctgcctgccatccttggcggaaacatgccgcgactgtc 499
Query: 764 ctcggaacaagcggacgccgtggcgcgagccaagaagtacgccatggagcagagcatcaa 823
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 500 ctcggaacaagcggacgccgtggcgcgagccaaaaagtacgccatggagcagagcatcaa 559
Query: 824 gatggtgctgatgaagcagacgctggcgcaccaacagcagcagatggcctcgcaaaggac 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gatggtgctgatgaagcagacgctggcgcaccaacagcagcagatggcctcgcaaaggac 619
Query: 884 gcaggtgcagcggcaacaggcgctcgcgctcatgtgcagagtgtacgtggggtcgatatc 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcaggtgcagcggcaacaggcgctcgcgctcatgtgcagagtgtacgtggggtcgatatc 679
Query: 944 gttcgagctcaaagaggacacgatccgccaagcgttcctgccgttcgggccgatcaagtc 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gttcgagctcaaagaggacacgatccgccaagcgttcctgccgttcgggccgatcaagtc 739
Query: 1004 catcaacatgtcgtgggacccagtcactcagaaacacaaagggttcgccttcgtcgagta 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 catcaacatgtcgtgggacccagtcactcagaaacacaaagggttcgccttcgtcgagta 799
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,777
Number of extensions: 5693
Number of successful extensions: 5693
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5693
Number of HSP's successfully gapped: 2
Length of query: 2776
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2759
Effective length of database: 8,119,229
Effective search space: 22400952811
Effective search space used: 22400952811
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)