BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03921 (UTR included)
(2497 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 86 3e-16
BF01056B2D01 78 8e-14
BF01044B1A07 72 5e-12
>BF01019A1H08
Length = 504
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1 ccaggcacagttgaagctcctttccctgcaacgcgatggacctggcactcgaaccgtgaa 60
|||||||| |||||||||||| |||||||||||||||||||| ||||| || || |||||
Sbjct: 451 ccaggcactgttgaagctcctctccctgcaacgcgatggacccggcacccgcacggtgaa 392
Query: 61 tccatggaatg 71
||||| |||||
Sbjct: 391 tccattgaatg 381
>BF01056B2D01
Length = 728
Score = 77.8 bits (39), Expect = 8e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 1 ccaggcacagttgaagctcctttccctgcaacgcgatggacctggcactcgaaccgtgaa 60
|||||| | |||||||||||| ||||||||| | |||||||| ||||| || || |||||
Sbjct: 163 ccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaa 104
Query: 61 tccatggaatgttgagaagattcgtct 87
| ||||||||||||||| | |||||||
Sbjct: 103 ttcatggaatgttgagaggtttcgtct 77
>BF01044B1A07
Length = 806
Score = 71.9 bits (36), Expect = 5e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 1 ccaggcacagttgaagctcctttccctgcaacgcgatggacctggcactcgaaccgtgaa 60
|||| |||||||||||||||| ||||||| |||||||||||| | ||| || || |||||
Sbjct: 514 ccagacacagttgaagctcctctccctgccacgcgatggacccgccacccgcacggtgaa 455
Query: 61 tccatggaatgttgagaagattcg 84
||||| ||| | ||||||| ||||
Sbjct: 454 tccattgaacgctgagaagtttcg 431
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 343,240
Number of extensions: 8850
Number of successful extensions: 8850
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8850
Number of HSP's successfully gapped: 3
Length of query: 2497
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2480
Effective length of database: 8,119,229
Effective search space: 20135687920
Effective search space used: 20135687920
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)