BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN03981 (UTR included)
(1788 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3035_C1 2143 0.0
>BF14_3035_C1
Length = 1489
Score = 2143 bits (1081), Expect = 0.0
Identities = 1148/1172 (97%), Gaps = 8/1172 (0%)
Strand = Plus / Plus
Query: 283 aggaccgttaaacaaagaacagttacattggttttcaaaatggtccagtaatatatcggt 342
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aggaccgttaaacaaggaacagttacattggttttcaaaatggtccagtaatatatcggt 376
Query: 343 ggagcaagagaagtttcttacctatgagggtcaagatgagatgatacttttggctgaacg 402
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 377 ggagcaagagaagtttcttacctatgagggtcaagatgaaatgatacttttggctgaacg 436
Query: 403 gatgcggaagagattcccaaatgccataaaagagaaatatgacaacaaatcatttctgtt 462
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aatgcggaagagattcccaaatgccataaaagagaaatatgacaacaaatcatttctgtt 496
Query: 463 taaatacacggcaacacagagagctcagcagagtgcgttatattttactattgggctatt 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 taaatacacggcaacacagagagctcagcagagtgcgttatattttactattgggctatt 556
Query: 523 cgacaggaagaaatcaagagatgttatttttgaacctgccatgaaagttgacacaacatt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cgacaggaagaaatcaagagatgttatttttgaacctgccatgaaagttgacacaacatt 616
Query: 583 gagattttacaaacactgtgataagtggcagaagcaagtgaaaaaaaatcctgagacata 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gagattttacaaacactgtgataagtggcagaagcaagtgaaaaaaaatcctgagacata 676
Query: 643 taaggaacaaagggcattcgctgtgagccaggccatgaatgacactttcgatgctgtggc 702
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 677 taaggaacaaagggcattcgctgtgagccaggccatgaatgacactttcaatgctgtggc 736
Query: 703 aaagaatctcggattggaaggagttttgtctaaagagattgttattttaatgtacaagat 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aaagaatctcggattggaaggagttttgtctaaagagattgttattttaatgtacaagat 796
Query: 763 atgtggctatgaaacttcgtggcacaaatactatacatcgccatggtgttacgggttcga 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 atgtggctatgaaacttcgtggcacaaatactatacatcgccatggtgttacgggttcga 856
Query: 823 tctgaaaagtattaaaaccttggaatattatcatgatttgaagcactattggttagatgg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tctgaaaagtattaaaaccttggaatattatcatgatttgaagcactattggttagatgg 916
Query: 883 atacggccacgagttaacgtctgtccaggcctgcatgatactcaaaaatatgtttgagat 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 atacggccacgagttaacgtctgtccaggcctgcatgatactcaaaaatatgtttgagat 976
Query: 943 gatggggaaagaaaataaaacagctgctttcctgttttcacattctggaacattgttgaa 1002
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 977 gatggggaaagaaaataaaacagctactttcctgttttcacattctggaacattgttgaa 1036
Query: 1003 attgttgacacatttaggcttatacaaaccacagacacatctgagaggagatagtgtcat 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 attgttgacacatttaggcttatacaaaccacagacacatctgagaggagatagtgtcat 1096
Query: 1063 agaggatagactctggagagcgtcgaatattgactgtttcgcatcaaatatagccttcgt 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 agaggatagactctggagagcgtcgaatattgactgtttcgcatcaaatatagccttcgt 1156
Query: 1123 tttatacaaatgtgatgacggagataagatattaacgctgcatcaagagagagttatcaa 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 tttatacaaatgtgatgacggagataagatattaacgctgcatcaagagagagttatcaa 1216
Query: 1183 gctgccaatgtgcgaggcggagctctgtccgttggaacatttgaaggcttattttcgtaa 1242
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 gctgccaatgtgcgagacggagctctgtccgttggaacatttgaaggcttattttcgtaa 1276
Query: 1243 caccatacataattgtgacttcgctgatatgtgtgaagctgtttaatgttatgcttgttg 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1277 caccatacataattgtgacttcgctgatatgtgtgaagctgtttaatgttatgcttgttg 1336
Query: 1303 ctatataaatacacacacacacacacaaaaaca--------cacacacacacacatatat 1354
||||||||||||||||||||||||||| | ||| || | ||||||||| | |
Sbjct: 1337 ctatataaatacacacacacacacacacacacacgaacaatcaaaaacacacacacacac 1396
Query: 1355 atatatataatactttgcttagataagttaaatttattcattatgtgattaattatgaat 1414
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1397 atatatataatactttgcttnnataagttaaatttattcattatgtgattaattatgaat 1456
Query: 1415 attgttacattgtctatatattttttttactg 1446
||||||| ||||||||||||||||||||||||
Sbjct: 1457 attgttaaattgtctatatattttttttactg 1488
Score = 262 bits (132), Expect = 2e-69
Identities = 135/136 (99%)
Strand = Plus / Plus
Query: 47 attgtaaacactcgaagatttggatgcttttgaggcatggaacccgtttgcctagtgcta 106
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 184 attgtaaacactcgaagatttggatgcttttgaggcatggaacccgtttgcctagtgcca 243
Query: 107 aggatatactgggcatgaatacgattttaaaagatttaaaatataaaattctaatgcaaa 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aggatatactgggcatgaatacgattttaaaagatttaaaatataaaattctaatgcaaa 303
Query: 167 acaatcatgggaaagg 182
||||||||||||||||
Sbjct: 304 acaatcatgggaaagg 319
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,439
Number of extensions: 13356
Number of successful extensions: 13356
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13343
Number of HSP's successfully gapped: 3
Length of query: 1788
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1771
Effective length of database: 8,119,229
Effective search space: 14379154559
Effective search space used: 14379154559
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)