BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04048 (UTR included)
(1243 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 121 3e-27
BF14_335_C4 113 7e-25
BF14_335_C2 96 2e-19
BF01049B1F01 82 2e-15
BF01044B1A07 80 1e-14
BF01056B2D01 72 2e-12
BF14_335_C5 68 4e-11
>BF01019A1H08
Length = 504
Score = 121 bits (61), Expect = 3e-27
Identities = 85/93 (91%)
Strand = Plus / Minus
Query: 604 ccttaaacctacatctgggtcgcaagtcccaggtactgttgaagctcctctcgcagcaag 663
||||||||||||| ||||||||||| ||||||| |||||||||||||||||| | ||||
Sbjct: 479 ccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaac 420
Query: 664 gcgatggacccggcacccgcacgaggaatccat 696
||||||||||||||||||||||| ||||||||
Sbjct: 419 gcgatggacccggcacccgcacggtgaatccat 387
>BF14_335_C4
Length = 1491
Score = 113 bits (57), Expect = 7e-25
Identities = 94/105 (89%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 604 ccttaaacctacatctgggtcgcaagtcccaggtactgttgaagctcctctcgcagcaag 663
||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||
Sbjct: 1250 ccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctc-ctgcaac 1308
Query: 664 gcgatggacccggcacccgcacgaggaatccatggaacgctgaga 708
||||||| ||| ||| ||||||| |||||||||||| |||||||
Sbjct: 1309 gcgatggtccccgcaaccgcacggtgaatccatggaatgctgaga 1353
>BF14_335_C2
Length = 1827
Score = 95.6 bits (48), Expect = 2e-19
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 605 cttaaacctacatctgggtcgcaagtcccaggtactgttgaagctcctctcgcagcaagg 664
|||||||||||| ||| ||||||| ||||||| |||||||||||||||||| | |||| |
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 665 cgatggacccggcacccgcacgaggaatccat 696
|| |||||||||||||||||| ||||||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatccat 831
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 2e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 599 gggctccttaaacctacatctgggtcgcaagtcccaggtactgttgaagctcctctc 655
|||| ||||| ||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 652 gggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctc 596
>BF01044B1A07
Length = 806
Score = 79.8 bits (40), Expect = 1e-14
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 618 ctgggtcgcaagtcccaggtactgttgaagctcctctcgcagcaaggcgatggacccggc 677
|||| |||| |||||||| || ||||||||||||||| | || | |||||||||||| |
Sbjct: 528 ctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacccgcc 469
Query: 678 acccgcacgaggaatccatggaacgctgagaa 709
||||||||| |||||||| ||||||||||||
Sbjct: 468 acccgcacggtgaatccattgaacgctgagaa 437
>BF01056B2D01
Length = 728
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 629 gtcccaggtactgttgaagctcctctcgcagcaaggcgatggacccggcacccgcacgag 688
|||||||| ||||||||||||||||| | |||| | |||||||||||||||||||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 689 gaatccatggaa 700
|||| |||||||
Sbjct: 106 gaattcatggaa 95
>BF14_335_C5
Length = 1597
Score = 67.9 bits (34), Expect = 4e-11
Identities = 86/104 (82%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 597 aggggctccttaaacctacatctgggtcgcaagtcccaggtactgttgaagctcctctcg 656
|||||| ||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 1491 aggggcgccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctcc 1550
Query: 657 cagcaaggcgatggacccggcacccgcacgaggaatccatggaa 700
|||| |||| |||||||||||||||| ||||||| ||||
Sbjct: 1551 gtgcaa--agatgcacccggcacccgcacggtgaatccacggaa 1592
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,394
Number of extensions: 3551
Number of successful extensions: 3551
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3550
Number of HSP's successfully gapped: 7
Length of query: 1243
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1226
Effective length of database: 8,119,229
Effective search space: 9954174754
Effective search space used: 9954174754
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)