BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04055 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1094_C1 1631 0.0
>BF14_1094_C1
Length = 852
Score = 1631 bits (823), Expect = 0.0
Identities = 844/851 (99%)
Strand = Plus / Plus
Query: 372 actaaaaataaaaacattcacgctttgagtttgcgtcgtattttatgtagtttaaatctt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 actaaaaataaaaacattcacgctttgagtttgcgtcgtattttatgtagtttaaatctt 61
Query: 432 ttctaatatctttccaaaaaagtaattactatcatatttataactatatcacgaatgtag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttctaatatctttccaaaaaagtaattactatcatatttataactatatcacgaatgtag 121
Query: 492 ttaaaagaaatggctgataatccaagcagcgacggtttatccgaagcggaaagattaaaa 551
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 122 ttaaaagaaatggctgataatccaagcagcgacggtttatccgaagcagaaagattaaaa 181
Query: 552 gaagaggaattggctcaagaactggaccacagtgattttaacgaagacgactctcaggaa 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaagaggaattggctcaagaactggaccacagtgattttaacgaagacgactctcaggaa 241
Query: 612 atatccttagaaatagaagagaaactgttgaaagatgaaccagaatacacaacgttagtc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 242 atatccttagaaatagaagagaaactgttgaaagatgaaccagaatacacaacattagtc 301
Query: 672 aactatggtgagagtatacaaagtgaacagagtatcacaacagagcatttcaatgataac 731
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aattatggtgagagtatacaaagtgaacagagtatcacaacagagcatttcaatgataac 361
Query: 732 ttagataaaggactagactctgagggtcttggtaatatatacactgaaaccactgacatg 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttagataaaggactagactctgagggtcttggtaatatatacactgaaaccactgacatg 421
Query: 792 tttataacacaatcggatctcagtgatccaaatgatcagtatggatcatacattaatgat 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tttataacacaatcggatctcagtgatccaaatgatcagtatggatcatacattaatgat 481
Query: 852 tattcctttgataactcgcaaacaattgaggagagccattcacagagtataggagaatat 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tattcctttgataactcgcaaacaattgaggagagccattcacagagtataggagaatat 541
Query: 912 tctacaagtaaggatgctagtgtgatgccaaacatgggagaattccagcaaagtgaaaat 971
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 542 tctacaagtaaggatgctagtgtgatgccaaacatgggagaattccagcaaagagaaaat 601
Query: 972 tcaaatggtgactatcaaactgcggaagatctgagcgaaagagaaagagagaagaaaaca 1031
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 602 tcaaatggtgactatcaaacagcagaagatctgagcgaaagagaaagagagaagaaaaca 661
Query: 1032 aagaaggaattagaagaagaggaaagagagaagatgcaagttttagtgtcaaactttact 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aagaaggaattagaagaagaggaaagagagaagatgcaagttttagtgtcaaactttact 721
Query: 1092 gaagaacaactaggaaggtatgaaatgtatagacgagcagcgtttcctaaggcggctgta 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 722 gaagaacaactaggaaggtatgaaatgtatagacgagcagcgtttcctaaggctgctgta 781
Query: 1152 aaacgtttgatgcagactatcacgggatgttcagtcggacagaatgttgtgatagctatg 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 aaacgtttgatgcagactatcacgggatgttcagtcggacagaatgttgtgatagctatg 841
Query: 1212 tctggtatcgc 1222
|||||||||||
Sbjct: 842 tctggtatcgc 852
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,670
Number of extensions: 20585
Number of successful extensions: 20585
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20581
Number of HSP's successfully gapped: 1
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)