BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04066 (UTR included)
(4234 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1559_C1 2401 0.0
>BF14_1559_C1
Length = 1251
Score = 2401 bits (1211), Expect = 0.0
Identities = 1239/1247 (99%), Gaps = 1/1247 (0%)
Strand = Plus / Plus
Query: 2523 ttcgctctgtcgtacgtacggcacttagttcaattgataaagaagacggatcctaatact 2582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttcgctctgtcgtacgtacggcacttagttcaattgataaagaagacggatcctaatact 61
Query: 2583 ttatcaaattacttattgtggcgtttcgtgagacatcgtgtcaacaatctggatgatcgc 2642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttatcaaattacttattgtggcgtttcgtgagacatcgtgtcaacaatctggatgatcgc 121
Query: 2643 ttccaatctgcgaaacaacaattctattacattttatttggacgcgaacaagcgccgcca 2702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttccaatctgcgaaacaacaattctattacattttatttggacgcgaacaagcgccgcca 181
Query: 2703 aggtggaagaactgtatatcccaagtgaattcaaatatgggcatggcattagggtcaatg 2762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aggtggaagaactgtatatcccaagtgaattcaaatatgggcatggcattagggtcaatg 241
Query: 2763 tttgttaggaaatactttgacgagatgagcaaaaacgacacgatgacgatgacgagggaa 2822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttgttaggaaatactttgacgagatgagcaaaaacgacacgatgacgatgacgagggaa 301
Query: 2823 atccaacaggcgttcagagagttactgcacatgacggattggattgatgaggagacaaaa 2882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atccaacaggcgttcagagagttactgcacatgacggattggattgatgaggagacaaaa 361
Query: 2883 aaactagccgcccataaagtcgactctatgatgctcagaataggctaccccgacttcatt 2942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaactagccgcccataaagtcgactctatgatgctcagaataggctaccccgacttcatt 421
Query: 2943 ctgaacaagaaagagctcgacgatcgttataaggaagtgcaaatacatccagataaatat 3002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctgaacaagaaagagctcgacgatcgttataaggaagtgcaaatacatccagataaatat 481
Query: 3003 tttgagaatatactgaatatacttcaacatctcactaaaatggaacagtcgcgaatcggc 3062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttgagaatatactgaatatacttcaacatctcactaaaatggaacagtcgcgaatcggc 541
Query: 3063 cagcctgttaataagacactatggaatacagcgccggcggtcgtgaacgcttattacagc 3122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cagcctgttaataagacactatggaatacagcgccggcggtcgtgaacgcttattacagc 601
Query: 3123 cgtaataaaaatcagatcatgttccccgctgggatcctacaaccacctttctaccatcga 3182
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cggaataaaaatcagatcatgttccccgctgggatcctacaaccacctttctaccatcga 661
Query: 3183 cacttcccgaggtcgctgaactttggaggcatcggagt-ggttattggtcacgaaattac 3241
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 662 cacttcccgaggtcgctgaactttggaggcatcggagtgggttattggtcacgaaattac 721
Query: 3242 ccacgggtttgacgacaagggtcgtttgtttgactgcgagggtaacctgcaccgctggtg 3301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ccacgggtttgacgacaagggtcgtttgtttgactgcgagggtaacctgcaccgctggtg 781
Query: 3302 gtctgattccgccatcgaggcattccatcgtcgagctcagtgcctcatcgaccagtacgg 3361
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 782 gtctgattccgccatcgaggcattccatcgtcgagctcagtgcctcatcgaccaatacgg 841
Query: 3362 acgatacgtagtgccagaagtcaatatgaaactagacggtgttaacacacagggtgagaa 3421
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 842 acgatacgtagtgccagaagtcaatatgaaactagacggcgttaacacacagggtgagaa 901
Query: 3422 tatagccgacaatggtggcgtgaagcaggcgttccacgcttaccaacgctggctgctaca 3481
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 tatagctgacaatggtggcgtgaagcaggcgttccacgcttaccaacgctggctgctaca 961
Query: 3482 gcacggcgccgttgacgagacgcttccagaactcaaccataccagcacgcagttgttctt 3541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 gcacggcgccgttgacgagacgcttccagaactcaaccataccagcacgcagttgttctt 1021
Query: 3542 tctcaacttcgcccaggtatggtgtggtgcaatgcggccggaagctatgagaaataaatt 3601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 tctcaacttcgcccaggtatggtgtggtgcaatgcggccggaagctatgagaaataaatt 1081
Query: 3602 aaagacagctgtccactctccaggaaggttccgtgtaattggaaccctttctaattccct 3661
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1082 aaagacagctgtccactctccaggaaggttccgtgtaattggaaccctctctaattccct 1141
Query: 3662 ggatttcgccagagaattccaatgtccaccgggatcgcccatgaatccgattcataaatg 3721
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1142 ggacttcgccagagaattccaatgtccaccgggatcgcctatgaatccgattcataaatg 1201
Query: 3722 tagtgtttggtagatatttattgcgttttagatatgtttgtgggtac 3768
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 tagtgtttggtagatatttattgcgttttagatatgtttgtgggtac 1248
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 532,920
Number of extensions: 11107
Number of successful extensions: 11107
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11106
Number of HSP's successfully gapped: 1
Length of query: 4234
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4216
Effective length of database: 8,109,745
Effective search space: 34190684920
Effective search space used: 34190684920
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)