BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04075 (UTR included)
(2872 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038A1A11 1584 0.0
BF01006X1B08 450 e-126
>BF01038A1A11
Length = 826
Score = 1584 bits (799), Expect = 0.0
Identities = 811/815 (99%)
Strand = Plus / Plus
Query: 1772 ttccagtacatcgggtgtaactgatattcacaagtctgatgcaacgacggtcgcaccacc 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ttccagtacatcgggtgtaactgatattcacaagtctgatgcaacgacggtcgcaccacc 71
Query: 1832 tgaagacggctttgctgcttactcgaccgctttgagcgtgaccatagcaataggctgttc 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tgaagacggctttgctgcttactcgaccgctttgagcgtgaccatagcaataggctgttc 131
Query: 1892 cttattgattcttaatgttcttatatttgctggtgtctattaccaaagagataaaacaag 1951
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 132 cttattgattcttaatgttcttatatttgctggtgtctattatcaaagagataaaacaag 191
Query: 1952 aatgaatggccaagatcatgcaaatggatcacatttaaagaaacgtggggaaaacggaca 2011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aatgaatggccaagatcatgcaaatggatcacatttaaagaaacgtggggaaaacggaca 251
Query: 2012 aatgccgaacaatatttgtggtgacttagaaagtgctttaacttatcagacaagcctcaa 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aatgccgaacaatatttgtggtgacttagaaagtgctttaacttatcagacaagcctcaa 311
Query: 2072 aaatgaccctgctacaattttaggccatcatcacactcactctcaccatcagttaccacc 2131
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaatgaccctgctataattttaggccatcatcacactcactctcaccatcagttaccacc 371
Query: 2132 tccagaattcgctgatcttccaagtaataatgtcgcagggatggccacgttacctcgtgc 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tccagaattcgctgatcttccaagtaataatgtcgcagggatggccacgttacctcgtgc 431
Query: 2192 gccgccacctcctaagataggaaaatccaatataaatacattagctagtggtcagttaca 2251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gccgccacctcctaagataggaaaatccaatataaatacattagctagtggtcagttaca 491
Query: 2252 agaaaatcagccattgctgtctgctcaccagatgcaaatgataaacacaaatacacttac 2311
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 agaaaatcagccgttgctgtctgctcaccagatgcaaatgataaacacaaatacacttac 551
Query: 2312 aaagaagaatacgcagttgaacgcgaagtctaatgttactatggaggagttgcgagtgtg 2371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aaagaagaatacgcagttgaacgcgaagtctaatgttactatggaggagttgcgagtgtg 611
Query: 2372 acgtcagcgagcctgactgcaacgggccggcagttgcagtgatgtggtacaccacgacga 2431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 acgtcagcgagcctgactgcaacgggccggcagttgcagtgatgtggtacaccacgacga 671
Query: 2432 gatcgtgtgactcccgccggaccttctagagtgcgtttcggactatatataactttgacg 2491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gatcgtgtgactcccgccggaccttctagagtgcgtttcggactatatataactttgacg 731
Query: 2492 cgctccaatttagaaggcgttaactgtgactaaagagacttgaatttactagtgattatg 2551
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 732 cgctccaatttagaaggcgttaactgtgactaatgagacttgaatttactagtgattatg 791
Query: 2552 acgttgagaactattcaataacattattatcatat 2586
|||||||||||||||||||||||||||||||||||
Sbjct: 792 acgttgagaactattcaataacattattatcatat 826
>BF01006X1B08
Length = 650
Score = 450 bits (227), Expect = e-126
Identities = 272/286 (95%), Gaps = 6/286 (2%)
Strand = Plus / Plus
Query: 2592 aaacgttaaattagtagagttcgaattgatcggaggtaaagtgtg--agacgttaatgta 2649
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aaacgttaaattagtagagttcgaattgatcggaggtaaagtgtgtgagacgttaatgta 60
Query: 2650 ttcgttgtaaattattgtaaataaataagtggtaataattatgtatatactataaaaaat 2709
||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 ttcgttgtaaattgttgtaaataaataagtggtaataattatg-atatactataaaannn 119
Query: 2710 gtt---aaacccagccgcatatccatccttataatggaataattcataactattatgttg 2766
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 nnnnnaaaacccagccgcatatccatccttataatggaataattcataactattatgttg 179
Query: 2767 gaaaaagaaaatcattgactctaaattatagaaattaataaaaagtctttatttgtttac 2826
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaaaaagaaaatcattgactttaaattatagaaattaataaaaagtctttatttgtttac 239
Query: 2827 ttccccgaatatagtttcttgtagttttataaaagctaatgtaagt 2872
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttccccgaatatagtttcttgtagttttataaaagctaatgtaagt 285
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 287,994
Number of extensions: 5199
Number of successful extensions: 5199
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5197
Number of HSP's successfully gapped: 3
Length of query: 2872
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2855
Effective length of database: 8,119,229
Effective search space: 23180398795
Effective search space used: 23180398795
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)