BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04111 (UTR included)
(1475 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2784_C1 1582 0.0
>BF14_2784_C1
Length = 1103
Score = 1582 bits (798), Expect = 0.0
Identities = 817/822 (99%), Gaps = 1/822 (0%)
Strand = Plus / Plus
Query: 606 tcaaaacttatggatgcattgaaacacgcttctacaatgctgggagagttgaggacatca 665
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 4 tcaaaacttatggatgcattgaaacatgcttctaca-tgctgggagagttgaggacatca 62
Query: 666 cttttgtcaccaaagagttattatgaattatacatggcaattactgatgagctccgccac 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cttttgtcaccaaagagttattatgaattatacatggcaattactgatgagctccgccac 122
Query: 726 ttggaactgtatcttctagaagaattccagaagggtcgtaaagttgcagatttgtatgaa 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttggaactgtatcttctagaagaattccagaagggtcgtaaagttgcagatttgtatgaa 182
Query: 786 ctagtacagtatgctgggaatattgtacctcgtttgtacctattaataacagtcggatta 845
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 183 ctagtacagtatgctgggaatattgtacctcgtttgtacctattgataacagtcggatta 242
Query: 846 gtttacatcaaaactaatacaaatttaaggagggatttgctcaaggatctggttgaaatg 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtttacatcaaaactaatacaaatttaaggagggatttgctcaaggatctggttgaaatg 302
Query: 906 tgccgtggcgtgcagcatccgttacgcgggctgtttctcaggaattatctcctccagtgt 965
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 303 tgccgtggcgtgcagcatccgttacgcgggctgtttctcaggaactatctcctccagtgt 362
Query: 966 acaaggaatgttctgcccgacaccgtggaagcggagaatgaaaatgaggggaatgtcaga 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acaaggaatgttctgcccgacaccgtggaagcggagaatgaaaatgaggggaatgtcaga 422
Query: 1026 gacgctattgactttgtgctgatgaatttcgccgaaatgaataagctgtgggtcaggatg 1085
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gacgctatcgactttgtgctgatgaatttcgccgaaatgaataagctgtgggtcaggatg 482
Query: 1086 caacaccaaggacattcgagggacaaagagcgtcgtgagcgtgaaagatcagaacttcgc 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 caacaccaaggacattcgagggacaaagagcgtcgtgagcgtgaaagatcagaacttcgc 542
Query: 1146 atcctggttggcaccaatcttgtccgagtgtcacagctggagtctgtcagtgaggcggat 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 atcctggttggcaccaatcttgtccgagtgtcacagctggagtctgtcagtgaggcggat 602
Query: 1206 tatcggaggctggtgctgccagctatattggaacaggtcgtgagctgcagggatcccata 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tatcggaggctggtgctgccagctatattggaacaggtcgtgagctgcagggatcccata 662
Query: 1266 gcacaggaatatctcatggagtgtatcatacaggtcttccccgatgagtttcacttggca 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gcacaggaatatctcatggagtgtatcatacaggtcttccccgatgagtttcacttggca 722
Query: 1326 aaccttcagccgttcctgaagtcatgcgctgaactgcagcccggtgttaacataaagaac 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aaccttcagccgttcctgaagtcatgcgctgaactgcagcccggtgttaacataaagaac 782
Query: 1386 atcattatagcgctcattgaacgacttgccgcctacagtcag 1427
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 atcattatagcgctcattgaacgacttgccgcctacagtcag 824
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 167,870
Number of extensions: 3242
Number of successful extensions: 3242
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3241
Number of HSP's successfully gapped: 1
Length of query: 1475
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1458
Effective length of database: 8,119,229
Effective search space: 11837835882
Effective search space used: 11837835882
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)