BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04121 (UTR included)
(1618 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038A1H03 1344 0.0
>BF01038A1H03
Length = 838
Score = 1344 bits (678), Expect = 0.0
Identities = 740/762 (97%), Gaps = 3/762 (0%)
Strand = Plus / Plus
Query: 331 gcagcatacggcatacagacgatttcatgaaaaattgctgccgtgcagtatttaatattg 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 gcagcatacggcatacagacgatttcatgaaaaattgctgccgtgcagtatttaatattg 89
Query: 391 tgttgtaatctgaataatattcgcacaaatagtgtcattcttacgtgtttt---ttttaa 447
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 90 tgttgtaatctgaattatattcgcacaaatagtgtcattcttacgtgtttttttttttaa 149
Query: 448 accgattgtgtatttatactaagatatttatatattaataaattgcaatcaaaatgtcaa 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 accgattgtgtatttatactaagatatttatatattaataaattgcaatcaaaatgtcaa 209
Query: 508 ttcagtgggttttcatagctggatatttgtatttcgagattttttttgtaatgttaatgt 567
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 210 ttcagtgggttttcatagctggatatttgtatttcgagattgcttttgtaatgttaatgt 269
Query: 568 tgttaccaatatttagtcccagaaaatggcacaaattttttcattcacgacttttcttta 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgttaccaatatttagtcccagaaaatggcacaaattttttcattcacgacttttcttta 329
Query: 628 tatttcgagaaagaacagctgtctatttttacggtcttctaggaattttgtgtatgtttt 687
| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 330 tgtttcgagaaagaacagctgtctatttctacggtcttctaggtattttgtgtatgtttt 389
Query: 688 taatagactctattagggaaatgagaaagtattctcactctagtgaaggaccaactcatt 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 taatagactctattagggaaatgagaaagtattctcactctagtgaaggaccaactcatt 449
Query: 748 tagcaaatgaaatgaaaggtagtgtgaaattgttccgcgctcagagaaacttttacatca 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 450 tagcaaatgaaatgaaaggtagtgtgaaattgttccgcgctcagagaaacttttatatca 509
Query: 808 cgagtttcgctatatttttagcttacgttatcagaagaattataacaatgattcttatcc 867
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ccagtttcgctatatttttagcttacgttatcagaagaattataacaatgattcttatcc 569
Query: 868 agcatgagctccaagttaaagctgatcaaattattaagaaagctgaagaaactgttaaat 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 agcatgagctccaagttaaagctgatcaaattattaagaaagctgaagaaactgttaaat 629
Query: 928 tagccaagactacagttctagaaaataatttggaatcacaggactatgaagaaattaaga 987
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 630 tagccaagactacagttctagaaaacaatttggaatcacaggactacgaagaaattaaga 689
Query: 988 acaggcttgatactaccgagactatcctagaagaacaaaaaataagaataaaggaacttg 1047
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 690 acaggcttgatactaccgagactattgtagaagaacaaaaaataagaataaaggaacttg 749
Query: 1048 aagaagatgctgcgaggtggaggttgaaatatgaagaagtta 1089
|||| |||| || |||||||||||||||||||||||||
Sbjct: 750 aagannntgctacgnnntggaggttgaaatatgaagaagtta 791
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,823
Number of extensions: 7302
Number of successful extensions: 7302
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7301
Number of HSP's successfully gapped: 1
Length of query: 1618
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1601
Effective length of database: 8,119,229
Effective search space: 12998885629
Effective search space used: 12998885629
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)