BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04124 (UTR included)
(1978 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039A2D11 1419 0.0
>BF01039A2D11
Length = 733
Score = 1419 bits (716), Expect = 0.0
Identities = 728/733 (99%)
Strand = Plus / Plus
Query: 505 gtctactttctgttaattgtgcgagaacctattctactgagaatataggtgataagaata 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctactttctgttaattgtgcgagaacctattctactgagaatataggtgataagaata 60
Query: 565 agaatgagaaagttcctgagaaagtagacattctgggacgatttttcccccagactccag 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaatgagaaagttcctgagaaagtagacattctgggacgatttttcccccagactccag 120
Query: 625 gcaatgttcaagatgcacaggaagttaaaaaagaacaggagaagtttgaacaggaacaga 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaatgttcaagatgcacaggaagttaaaaaagaacaggagaagtttgaacaggaacaga 180
Query: 685 aagaaaaaaaccaagagaatgagaacagctggagaaggatgaagattggatttgcagttt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 aagaaaaaaaccaagagaatgagaacagctggagaaggatgaagattggatttgcggttt 240
Query: 745 ttggtggtgcgatgacagtgatgggtggttgtatggtaattgagatgggagctcctcgac 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggtggtgcgatgacagtgatgggtggttgtatggtaattgagatgggagctcctcgac 300
Query: 805 gctccgatgacgggacacccctggaggacgagttttcccacttgcccctacccctgcagt 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctccgatgacgggacacccctggaggacgagttttcccacttgcccctacccctgcagt 360
Query: 865 atctcagacgaacatggaaggaacttactttttatgaaaagatgataaaagagccgtctc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atctcagacgaacatggaaggaacttactttttatgaaaagatgataaaagagccgtctc 420
Query: 925 gagagaaactattaccggacacgttgccgcctccataccagccaacctacaccctggtgc 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagagaaactattaccggacacgttgccgcctccataccagccaacctacaccctggtgc 480
Query: 985 tggagttcaccgacgtcctcgtgcatccggactggacctatcagaccggatggagattta 1044
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggagttcactgacgtcctcgtgcatccggactggacctatcagaccggatggagattta 540
Query: 1045 agaagcggccgggagtagaccagttcctccaaacggtcgccaattccgactacgaggtgg 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaagcggccgggagtagaccagttcctccaaacggtcgccaattccgactacgaggtgg 600
Query: 1105 tgatctttacttcggagaacgcgttcatgatctatcccgtgttggagaagttggaccccg 1164
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgatctttacttcggnnaacgcgttcatgatctatcccgtgttggagaagttggaccccg 660
Query: 1165 agaacaaattcatctcatacaagctgttcagagattccacacacttcatagacggcgtac 1224
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 661 agaacaaattcatctcatacaagctgttcagngattccacacacttcatagacggcgtac 720
Query: 1225 acgtcaagaactt 1237
|||||||||||||
Sbjct: 721 acgtcaagaactt 733
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,966
Number of extensions: 16097
Number of successful extensions: 16097
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 16097
Number of HSP's successfully gapped: 1
Length of query: 1978
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1961
Effective length of database: 8,119,229
Effective search space: 15921808069
Effective search space used: 15921808069
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)