BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04137 (UTR included)
(2143 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3300_C1 1796 0.0
>BF14_3300_C1
Length = 977
Score = 1796 bits (906), Expect = 0.0
Identities = 915/918 (99%)
Strand = Plus / Plus
Query: 635 gaccaaatctagctcagttcttggggaaactaaggagcctgcccccgccccctcccccgc 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gaccaaatctagctcagttcttggggaaactaaggagcctgcccccgccccctcccccgc 119
Query: 695 tgactccggagtctcggagcttgagagagatcatcatgactacagttccacggatcgtct 754
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 120 tgactccggagtctcggagcttgagagagatcatcatgactacagttcaacggatcgtct 179
Query: 755 ccgtcacgacgtccgtcgaccgcggctgatgctgcagagctatcgtcgcgacgagagaga 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ccgtcacgacgtccgtcgaccgcggctgatgctgcagagctatcgtcgcgacgagagaga 239
Query: 815 cgtggaactggcgagagtgaagagagaccgcgctgtcttgagacaacgattagaagatac 874
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 240 cgtggaactggcgagagtgaagagagaccgcgctgtcttaagacaacgattagaagatac 299
Query: 875 agagtggagcctgtgtcagagggctggggagatcgctttgttgaaaacacagctgaagga 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agagtggagcctgtgtcagagggctggggagatcgctttgttgaaaacacagctgaagga 359
Query: 935 ggcccagaacgaacaaacggctaaaggccacgagtaccttacactaaaatccgattgccg 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ggcccagaacgaacaaacggctaaaggccacgagtaccttacactaaaatccgattgccg 419
Query: 995 ccaacttagggaggcgctggataagaaggacaaagagatattgaggctacgagcagagtc 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ccaacttagggaggcgctggataagaaggacaaagagatattgaggctacgagcagagtc 479
Query: 1055 tgaggagaaagagaagtctatgaagaaacttcaagcggaagttgagagactgaacaacga 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgaggagaaagagaagtctatgaagaaacttcaagcggaagttgagagactgaacaacga 539
Query: 1115 cctgatgaacagcgtcacagacttaacgaagactaaagagagcaataagaaagaaataga 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cctgatgaacagcgtcacagacttaacgaagactaaagagagcaataagaaagaaataga 599
Query: 1175 gaaactcaaaacggaagtcaaagagcttagacaggaattatcagacgtgtcactgagcgg 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gaaactcaaaacggaagtcaaagagcttagacaggaattatcagacgtgtcactgagcgg 659
Query: 1235 atacgagggtatcgagtgcggaaggactatgagggggatctacgatgtgtgtaagacgaa 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atacgagggtatcgagtgcggaaggactatgagggggatctacgatgtgtgtaagacgaa 719
Query: 1295 cgaatatcactggacatcgagcgacagtgcgctcgaagacgcggaggttcagagactgaa 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cgaatatcactggacatcgagcgacagtgcgctcgaagacgcggaggttcagagactgaa 779
Query: 1355 tggagaactaccagactcctgcagcgagccctgtccggccggcgccatagtcgacagact 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tggagaactaccagactcctgcagcgagccctgtccggccggcgccatagtcgacagact 839
Query: 1415 gaaatgcgagatacagaacaaagagcagcagttcaacaacgagaggagaaaatggtctga 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 840 gaaatgcgagatacagaacaaagagcagcagttcaacaacgagaggagaaaatggtcgga 899
Query: 1475 cgaaaaggacaaagtactgagataccagaagcagctgcaaatgaactacgtccagatgtt 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 cgaaaaggacaaagtactgagataccagaagcagctgcaaatgaactacgtccagatgtt 959
Query: 1535 caaaagatcgcgcactct 1552
||||||||||||||||||
Sbjct: 960 caaaagatcgcgcactct 977
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,169
Number of extensions: 7001
Number of successful extensions: 7001
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7001
Number of HSP's successfully gapped: 1
Length of query: 2143
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2126
Effective length of database: 8,119,229
Effective search space: 17261480854
Effective search space used: 17261480854
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)