BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04143 (UTR included)
(1585 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1706_C1 1055 0.0
BF14_1547_C2 74 8e-13
BF01046A1H05 70 1e-11
BF14_3403_C1 70 1e-11
BF14_1626_C1 70 1e-11
BF01044A1D01 68 5e-11
>BF14_1706_C1
Length = 820
Score = 1055 bits (532), Expect = 0.0
Identities = 572/584 (97%), Gaps = 1/584 (0%)
Strand = Plus / Plus
Query: 624 gatgaacacttaaatattgtcagcacaggacctaatataatcatacatcaggatgatgaa 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gatgaacacttaaatattgtcagcacaggacctaatataatcatacatcaggatgatgaa 71
Query: 684 gtattgaataatatgaatcaatggtgtgttactcaacatggtgagagtggattgacggag 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gtattgaataatatgaatcaatggtgtgttactcaacatggtgagagtggattgacggag 131
Query: 744 gcttgtcgaaaatctcaaataacattaaccaaagcagaaaatgacattttaaattttgtc 803
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcttgtcaaaaatctcaaataacattaaccaaagcagaaaatgacattttaaattttgtc 191
Query: 804 aaatctcatgtacctgagaaattgtgccctttaggaggaaatagtgtttatatggacaga 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaatctcatgtacctgagaaattgtgccctttaggaggaaatagtgtttatatggacaga 251
Query: 864 ctattcttacaaaaatatatgcccaaattaaacaactatttgcactatagaattattgat 923
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctatttttacaaaaatatatgccgaaattaaacaactatttgcactatagaattattgat 311
Query: 924 gtgagtaccataaaggagttagctaagaggtggttcccgaaagagtattcgaggataccg 983
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 312 gtgagtaccataaaggagttagctaagaggtggttcccgaaggagtattcaaggataccg 371
Query: 984 acaaagaagtttgaacatagatgtttgaatgatatcaaagaaagcgttgaggaacttaag 1043
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 372 acaaagaagtttgaacatagatgtttgaatgatatcaaagaaagtgttgaggaacttaag 431
Query: 1044 tattatagaaataatatatttaaggttaatgaaccattataattttaaaagtcgtaattt 1103
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 432 tattatagaaataatatatttaaggttaatgaaccattataattttaaaaatcctaattt 491
Query: 1104 agtagaccaattgttaccaaacattgcttaagatattttcctgctttgtgatataaaatc 1163
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 492 agtagaccaattgttaccaaacattgcttaagatattttcctgctttgagatataaaatc 551
Query: 1164 tcttcaacatata-tatatatatatatatatatatatatgtata 1206
||||||||||| | ||||||||||||||||||||||||| ||||
Sbjct: 552 tcttcaacatacactatatatatatatatatatatatatatata 595
>BF14_1547_C2
Length = 723
Score = 73.8 bits (37), Expect = 8e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1166 ttcaacatatatatatatatatatatatatatatatgtata 1206
|||||||||||||||||||||||||||||||||||| ||||
Sbjct: 646 ttcaacatatatatatatatatatatatatatatatatata 686
>BF01046A1H05
Length = 918
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1172 atatatatatatatatatatatatatatatgtata 1206
|||||||||||||||||||||||||||||||||||
Sbjct: 842 atatatatatatatatatatatatatatatgtata 808
>BF14_3403_C1
Length = 1210
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1172 atatatatatatatatatatatatatatatgtataactt 1210
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 1145 atatatatatatatatatatatatatatatatataactt 1183
>BF14_1626_C1
Length = 705
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1172 atatatatatatatatatatatatatatatgtata 1206
|||||||||||||||||||||||||||||||||||
Sbjct: 698 atatatatatatatatatatatatatatatgtata 664
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1173 tatatatatatatatatatatatatatatgtata 1206
||||||||||||||||||||||||||||||||||
Sbjct: 667 tatatatatatatatatatatatatatatgtata 634
>BF01044A1D01
Length = 742
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 1172 atatatatatatatatatatatatatatatgtat 1205
||||||||||||||||||||||||||||||||||
Sbjct: 44 atatatatatatatatatatatatatatatgtat 11
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,738
Number of extensions: 17396
Number of successful extensions: 17396
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 17356
Number of HSP's successfully gapped: 7
Length of query: 1585
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1568
Effective length of database: 8,119,229
Effective search space: 12730951072
Effective search space used: 12730951072
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)