BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04149 (UTR included)
(1750 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2E03 1134 0.0
>BF01020B2E03
Length = 613
Score = 1134 bits (572), Expect = 0.0
Identities = 601/611 (98%)
Strand = Plus / Plus
Query: 428 gttccgcaaccagtatgacagtgatgtcacagtgtggagccctcagggtcgactccatca 487
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gttccgcaaccagtacgacagtgatgtcacagtgtggagccctcagggtcgactccatca 62
Query: 488 agtggagtacgctatggaagctgtaaaactgggctcagccacggttggacttaagaataa 547
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 63 agtggagtacgctatggaagctgttaaactgggctcagccacggtgggacttaagaataa 122
Query: 548 acaatttgccgtcctaatagctctcaagcgggccgtgagtgaactgtcagcttatcagaa 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 acaatttgccgtcctaatagctctcaagcgggccgtgagtgaactgtcagcttatcagaa 182
Query: 608 gaagatcattcctattgatgatcatattggtatttcaatatctggattgactgctgatgc 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gaagatcattcctattgatgatcatattggtatttcaatatctggattgactgctgatgc 242
Query: 668 tagaatgctaagccgtttcatgaggacggaatgcctcaatcatcgttatgctcatgacgc 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tagaatgctaagccgtttcatgaggacggaatgcctcaatcatcgttatgctcatgacgc 302
Query: 728 accaatgccggttggcaggttaatttctcttgtcggcaacaagatgcagatatgtaccca 787
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 303 accaatgccggttggcaggttaatttctcttgtcggcaacaagatgcagatttgtaccca 362
Query: 788 gcggtatgataagcgacctttaggagttggcctgctggttgctgggtatgatgatcaagg 847
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gcggtatgataaacgacctttaggagttggcctgctggttgctgggtatgatgatcaagg 422
Query: 848 tcctcatatctaccagacatgtccttcggccaattactttgactgccgtgccatggctat 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tcctcatatctaccagacatgtccttcggccaattactttgactgccgtgccatggctat 482
Query: 908 cggtgcacgatcgcaatccgcaagaacttacttggagaaacatcttaacacgttcctcga 967
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 483 cggtgcacgatcgcaatccgcaagaacttacttggagaaacatcttaacacattccttga 542
Query: 968 ttgtgatctgaatgaactcgtagctcatggcctaagagctttaagagatacactgccaaa 1027
||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 543 ttgcgatctgaatgaacttgtagctcatggcctaagagctttangagatacactgccaaa 602
Query: 1028 tgaggttgatc 1038
|||||||||||
Sbjct: 603 tgaggttgatc 613
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,160
Number of extensions: 5433
Number of successful extensions: 5433
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5433
Number of HSP's successfully gapped: 1
Length of query: 1750
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1733
Effective length of database: 8,119,229
Effective search space: 14070623857
Effective search space used: 14070623857
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)