BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04165 (UTR included)
(1087 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2A02 1445 0.0
>BF01042A2A02
Length = 741
Score = 1445 bits (729), Expect = 0.0
Identities = 729/729 (100%)
Strand = Plus / Plus
Query: 359 gcagaaggacatattctcgttatctcagatggggggagggtcgtatccgatgccccaagg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagaaggacatattctcgttatctcagatggggggagggtcgtatccgatgccccaagg 60
Query: 419 cttttctatgggacacggtgccaatatgagcgccgtaggcatgagacaggataccatggg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttttctatgggacacggtgccaatatgagcgccgtaggcatgagacaggataccatggg 120
Query: 479 catgacagctgaggatgagtggtacaacaaatcgctgtccgctctccggatgaacagcgt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgacagctgaggatgagtggtacaacaaatcgctgtccgctctccggatgaacagcgt 180
Query: 539 gaacagccacgcgaaccttcccgcgccaatgttacaataccaaacctaatcgctgctgca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacagccacgcgaaccttcccgcgccaatgttacaataccaaacctaatcgctgctgca 240
Query: 599 cgccgactatccgtcggcgcacgactatacgccgtgaaacactcgaacaatgagtgttta 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgccgactatccgtcggcgcacgactatacgccgtgaaacactcgaacaatgagtgttta 300
Query: 659 attaagaatgcatggtaataaaattatttatttaccggcatgttacaagcatacaactgg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attaagaatgcatggtaataaaattatttatttaccggcatgttacaagcatacaactgg 360
Query: 719 aagtaaagtgtattagcggcttaacatcacatttatatcatcgaagtgtatagtttgtgg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagtaaagtgtattagcggcttaacatcacatttatatcatcgaagtgtatagtttgtgg 420
Query: 779 aaaataacgaaaaactcttgagtgattattttttaagtcaataacagatttgtatcctga 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaataacgaaaaactcttgagtgattattttttaagtcaataacagatttgtatcctga 480
Query: 839 attacaattaatattacctggctttcacttattatccgatgttgaaaaatttttcgtcct 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attacaattaatattacctggctttcacttattatccgatgttgaaaaatttttcgtcct 540
Query: 899 taagcgtcacctccgaataattgtccaaagccgtatagtcaaatattcattaatttaata 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taagcgtcacctccgaataattgtccaaagccgtatagtcaaatattcattaatttaata 600
Query: 959 tatttttttctactcaaatcacgattcacattgtagccaaaaataattaatgaatgaatc 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatttttttctactcaaatcacgattcacattgtagccaaaaataattaatgaatgaatc 660
Query: 1019 ctataagcccatcaaacagtaggcttggacgatgtaagtatttagatctatgtataggta 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctataagcccatcaaacagtaggcttggacgatgtaagtatttagatctatgtataggta 720
Query: 1079 caaaataga 1087
|||||||||
Sbjct: 721 caaaataga 729
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 164,498
Number of extensions: 4119
Number of successful extensions: 4119
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4119
Number of HSP's successfully gapped: 1
Length of query: 1087
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1070
Effective length of database: 8,119,229
Effective search space: 8687575030
Effective search space used: 8687575030
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)