BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04166 (UTR included)
(1765 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B2G12 769 0.0
>BF01019B2G12
Length = 735
Score = 769 bits (388), Expect = 0.0
Identities = 396/399 (99%)
Strand = Plus / Plus
Query: 587 atacccaactttggaatctgataagaaaaaaccatcctcgaaagatcacggttaccgtgc 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atacccaactttggaatctgataagaaaaaaccatcctcgaaagatcacggttaccgtgc 396
Query: 647 cactgtcaatgacttcacaaatttgcatactttggcttcaccacgatatgttaagagtca 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cactgtcaatgacttcacaaatttgcatactttggcttcaccacgatatgttaagagtca 456
Query: 707 tctgccactctctctgttgccgcctaagctacttgatactgcaaaggtgttttatatagc 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tctgccactctctctgttgccgcctaagctacttgatactgcaaaggtgttttatatagc 516
Query: 767 tcgggatcctcgtgacgtgattgtatctttcttcttcatgcacaaattgtttagatactt 826
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 517 tcgggatcctcgtgacgtgattgtatcgttcttcttcatgcacaaattgtttagatactt 576
Query: 827 tgacgaaagtgtggagttgcaggaattttgggaacttttcaaaaaagatttggtcataca 886
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgacgaaagtgtggagttggaggaattttgggaacttttcaaaaaagatttggtcataca 636
Query: 887 tatgcctatatttccccacgtaaaggagtcttgggaaaaacgaaaacaccccaatatgat 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tatgcctatatttccccacgtaaaggagtcttgggaaaaacgaaaacaccccaatatgat 696
Query: 947 gtttcttttttatgaggaaatgcaaaaggatctacgtct 985
||||| |||||||||||||||||||||||||||||||||
Sbjct: 697 gtttcntttttatgaggaaatgcaaaaggatctacgtct 735
Score = 143 bits (72), Expect = 1e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 498 aatatgaaccagacattagaatttccgcatgaaatcagagaggttactgaagaagaggac 557
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 aatatgaaccannntttagaatttccgcatgaaatcagagaggttactgaagaagaggac 79
Query: 558 ttgattgtcaagaaatactacaaga 582
|||||||||||||||||||||||||
Sbjct: 80 ttgattgtcaagaaatactacaaga 104
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,640
Number of extensions: 5982
Number of successful extensions: 5982
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5982
Number of HSP's successfully gapped: 2
Length of query: 1765
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1748
Effective length of database: 8,119,229
Effective search space: 14192412292
Effective search space used: 14192412292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)