BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04183 (UTR included)
(1477 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A2E04 1183 0.0
>BF01009A2E04
Length = 784
Score = 1183 bits (597), Expect = 0.0
Identities = 612/617 (99%)
Strand = Plus / Plus
Query: 738 ctggacgcgaatattctggcagcgaaattagctgcaagtatgaataaaccacccaaatgt 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggacgcgaatattctggcagcgaaattagctgcaagtatgaataaaccacccaaatgt 60
Query: 798 gtcgaaagctgtggaagtgaagatgaggaagagactgaagatgcacgtcaaaagagactc 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgaaagctgtggaagtgaagatgaggaagagactgaagatgcacgtcaaaagagactc 120
Query: 858 gagtttgaaaagaagagaaaaatgcattacaacgaatttcaggctctccaactggcgcgg 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagtttgaaaagaagagaaaaatgcattacaacgaatttcaggctctccaactggcgcgg 180
Query: 918 caacttatggctcaggaggaagaggatgaggatgacaagacccaagcttcaaacacctga 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caacttatggctcaggaggaagaggatgaggatgacaagacccaagcttcaaacacctga 240
Query: 978 ctcacaacattacatattatttgctaaatgttccagctggtatgtagttttcaggctcaa 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 ctcacaacattacatattatttgctaaatgttccagctggtatgtagttttcaggctgaa 300
Query: 1038 aagaaaactgtacacctttctatcctttaaaacaaacaaataaaaaaaaatgatgaccag 1097
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 aagaaaactgtacacctttctatcctttaaaacaaacaaataaaaaaaaataatgaccag 360
Query: 1098 caatcatcatgtgggttgccattctttgttagttctaattttcatatttcccgtcaactg 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caatcatcatgtgggttgccattctttgttagttctaattttcatatttcccgtcaactg 420
Query: 1158 ttccaatgttggtgggtagaattatatttgggctgttttctatgaatcaactaattaatt 1217
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 421 ttctaatgttggtgggtagaattatatttgggctgttttctatgaatcaacttattaatt 480
Query: 1218 ttaaatactacccactataagtaacacatcccacttaaaacatgctaaaattgcttgttt 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttaaatactacccactataagtaacacatcccacttaaaacatgctaaaattgcttgttt 540
Query: 1278 gtattaatttccagggctcttatcaagtgccagcttagcagacaatatgttggaacgagc 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtattaatttccagggctcttatcaagtgccagcttagcagacaatatgttggaacgagc 600
Query: 1338 tgttaattcatgccata 1354
| |||||||||||||||
Sbjct: 601 tcttaattcatgccata 617
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,815
Number of extensions: 6948
Number of successful extensions: 6948
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6948
Number of HSP's successfully gapped: 1
Length of query: 1477
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1460
Effective length of database: 8,119,229
Effective search space: 11854074340
Effective search space used: 11854074340
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)