BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04202 (UTR included)
(1765 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2B01 1247 0.0
>BF01016B2B01
Length = 711
Score = 1247 bits (629), Expect = 0.0
Identities = 635/637 (99%)
Strand = Plus / Plus
Query: 532 atcctacattgacatacgaccaaatatataacacaacgacttacgcccaaataccgcgtt 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 atcctacattgacatacgaccaaatatataacacaacgacttacgcccaaataccgcgtt 86
Query: 592 atatacaaacagacagatacaatggtagcagtactagttataacaatagtcgtttaaatg 651
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 87 atatacaaacagacagatacaatggtggcagtactagttataacaatagtcgtttaaatg 146
Query: 652 ataccaaagaaaatttatttaagtttcaagacagatatgagataagtagcaagagagacc 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ataccaaagaaaatttatttaagtttcaagacagatatgagataagtagcaagagagacc 206
Query: 712 tcctcgttggattcgcacacgatccattcagatactcaataccagaagctgattacgcta 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tcctcgttggattcgcacacgatccattcagatactcaataccagaagctgattacgcta 266
Query: 772 aaggagtaagagtagtgaacccccagagggtaaacagtgaccgaggtaagcgtggtgtgg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaggagtaagagtagtgaacccccagagggtaaacagtgaccgaggtaagcgtggtgtgg 326
Query: 832 ttcatctgtacaatatgttaacctgtgccacgggctgcgatcctgtatcatacaagggtt 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcatctgtacaatatgttaacctgtgccacgggctgcgatcctgtatcatacaagggtt 386
Query: 892 acggctgctattgtggattccttgggtccgggcgacccaccgatggaatcgataattgct 951
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 387 acggctgctattgtggattcctcgggtccgggcgacccaccgatggaatcgataattgct 446
Query: 952 gtagactgcatgacgaatgttacgagaatatctactgtccattctacacggtctatttcc 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtagactgcatgacgaatgttacgagaatatctactgtccattctacacggtctatttcc 506
Query: 1012 agccgtactactggaaatgctatcatggagagccgctctgtgctctggagaacttccaga 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agccgtactactggaaatgctatcatggagagccgctctgtgctctggagaacttccaga 566
Query: 1072 cccaccctgaggctgtgaacggctgtgccggcaggctgtgcgaatgtgacagacgttttg 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cccaccctgaggctgtgaacggctgtgccggcaggctgtgcgaatgtgacagacgttttg 626
Query: 1132 ctatgtgcgttaagaaatattcttgtccgcgaggccg 1168
|||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctatgtgcgttaagaaatattcttgtccgcgaggccg 663
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 226,669
Number of extensions: 4853
Number of successful extensions: 4853
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4853
Number of HSP's successfully gapped: 1
Length of query: 1765
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1748
Effective length of database: 8,119,229
Effective search space: 14192412292
Effective search space used: 14192412292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)