BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04208 (UTR included)
(1783 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B1H12 714 0.0
BF01027B2F03 383 e-106
>BF01032B1H12
Length = 646
Score = 714 bits (360), Expect = 0.0
Identities = 405/420 (96%)
Strand = Plus / Plus
Query: 539 agaaaatttaggagataaagtagtgacggttacccttacaccaaatggtctggctgacgg 598
|||||||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 227 agaaaatttaggtgataaagtagtaacagttacccttacaccaaatggtctggctgatgg 286
Query: 599 catatctaagaatgacagaggagaagaatattttgttactccatatgaggttgaaatgac 658
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 catatctgagaatgacagaggagaagaatattttgttactccatatgaggttgaaatgac 346
Query: 659 tatgaagcaatttttagacatattatatcagaagactgcaaatgtgattccgtacatcca 718
||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 347 aatgaatcaatttttagacatattatatcagaagactgtgaatctgattccgtacatcca 406
Query: 719 aagacagaattcaaaccttacagagaactttggtgaactcattgatgatgttgagaaaca 778
||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 407 aagacagaactcaaaccttacagaggactttggtgaactcatagatgatgttgagaaaca 466
Query: 779 tatcagttttgcgagcaaagcttttaataagaagccagatgccatcaacttttggatggg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tatcagttttgcgagcaaagcttttaataagaagccagatgccatcaacttttggatggg 526
Query: 839 tgacgaaagagctgtgacatcaatgcacaaagatccttatgagaacatatactgtgttat 898
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 agatgaaagagctgtgacatcaatgcacaaagatccttatgagaacatatactgtgttat 586
Query: 899 tgatggatacaaagacttcatacttattccaccgacagatttaccttttgtcccatacag 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgatggatacaaagacttcatacttattccaccgacagatttaccttttgtcccatacag 646
>BF01027B2F03
Length = 688
Score = 383 bits (193), Expect = e-106
Identities = 199/201 (99%)
Strand = Plus / Plus
Query: 862 tgcacaaagatccttatgagaacatatactgtgttattgatggatacaaagacttcatac 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tgcacaaagatccttatgagaacatatactgtgttattgatggatacaaagacttcatac 154
Query: 922 ttattccaccgacagatttaccttttgtcccatacagaagatatccccaagcggagttta 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttattccaccgacagatttaccttttgtcccatacagaagatatccccaagcggagttta 214
Query: 982 agagaaccggcgataattggagtgtagttcctaaaactactgattcagaagtgggcagtg 1041
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 215 agagaactggcgataattggagtgtagtccctaaaactactgattcagaagtgggcagtg 274
Query: 1042 aactaccttggatttgtatag 1062
|||||||||||||||||||||
Sbjct: 275 aactaccttggatttgtatag 295
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 228,874
Number of extensions: 4533
Number of successful extensions: 4533
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4533
Number of HSP's successfully gapped: 2
Length of query: 1783
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1766
Effective length of database: 8,119,229
Effective search space: 14338558414
Effective search space used: 14338558414
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)