BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04210 (UTR included)
(1189 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2D01 101 2e-21
BF14_335_C2 101 2e-21
BF01019A1H08 98 4e-20
BF14_335_C5 88 4e-17
BF01014B2F02 84 6e-16
BF01048A1E04 74 6e-13
BF01049B1F01 74 6e-13
BF01055B2A04 68 3e-11
>BF01056B2D01
Length = 728
Score = 101 bits (51), Expect = 2e-21
Identities = 78/87 (89%), Gaps = 5/87 (5%)
Strand = Plus / Minus
Query: 620 gtcccaggcactgttgaagctcctctccctgcaatg-----gacccggcacccgcacgat 674
||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 675 gaatccatggaatgatgagaggtttcg 701
|||| ||||||||| ||||||||||||
Sbjct: 106 gaattcatggaatgttgagaggtttcg 80
>BF14_335_C2
Length = 1827
Score = 101 bits (51), Expect = 2e-21
Identities = 87/99 (87%)
Strand = Plus / Minus
Query: 463 acatatttatgtattcgagaatcttaaagcgcgttgtgatgatagagcttacggttcctt 522
|||||||| |||||||| |||| |||||||||| | | | ||||||| |||||||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 523 gggaaaccaacatccccaaagaccatgccatcaaggtca 561
|| | ||||||||||||||| ||||||||||||||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtca 1179
>BF01019A1H08
Length = 504
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%), Gaps = 5/85 (5%)
Strand = Plus / Minus
Query: 621 tcccaggcactgttgaagctcctctccctgca-----atggacccggcacccgcacgatg 675
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 453 tcccaggcactgttgaagctcctctccctgcaacgcgatggacccggcacccgcacggtg 394
Query: 676 aatccatggaatgatgagaggtttc 700
||||||| ||||| | |||||||||
Sbjct: 393 aatccattgaatgctaagaggtttc 369
>BF14_335_C5
Length = 1597
Score = 87.7 bits (44), Expect = 4e-17
Identities = 67/74 (90%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 617 caagtcccaggcactgttgaagctcctctccctgca---atggacccggcacccgcacga 673
||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 1520 caagtcccaggcactgttgaagctcctctccgtgcaaagatgcacccggcacccgcacgg 1579
Query: 674 tgaatccatggaat 687
|||||||| |||||
Sbjct: 1580 tgaatccacggaat 1593
>BF01014B2F02
Length = 623
Score = 83.8 bits (42), Expect = 6e-16
Identities = 77/88 (87%), Gaps = 3/88 (3%)
Strand = Plus / Minus
Query: 617 caagtcccaggcactgttgaagctcctctccctgcaa---tggacccggcacccgcacga 673
||||||| |||| ||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 610 caagtcctaggcgctgctgaagctcctctccctgcaacgctggacccggcacccgcacgg 551
Query: 674 tgaatccatggaatgatgagaggtttcg 701
|| ||||| ||||| ||||||||||||
Sbjct: 550 tgcatccactgaatgctgagaggtttcg 523
>BF01048A1E04
Length = 789
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 653 atggacccggcacccgcacgatgaatccatggaatgatgagaggtttcg 701
|||||||||||||||||||| ||||||||||||| ||| ||||||||||
Sbjct: 7 atggacccggcacccgcacggtgaatccatggaaagataagaggtttcg 55
>BF01049B1F01
Length = 840
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 617 caagtcccaggcactgttgaagctcctctccctgcaa 653
|||||||||||||||||||||||||||||||||||||
Sbjct: 625 caagtcccaggcactgttgaagctcctctccctgcaa 589
>BF01055B2A04
Length = 830
Score = 67.9 bits (34), Expect = 3e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 504 atagagcttacggttccttgggaaaccaacatccccaaagaccatgccatcaaggtca 561
|||||||||||| |||| ||| ||||||||||||||||||||| ||||| | ||||||
Sbjct: 541 atagagcttacgattccctggaaaaccaacatccccaaagaccgtgccaccgaggtca 484
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 162,900
Number of extensions: 3572
Number of successful extensions: 3572
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 3568
Number of HSP's successfully gapped: 8
Length of query: 1189
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1172
Effective length of database: 8,119,229
Effective search space: 9515736388
Effective search space used: 9515736388
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)