BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04222 (UTR included)
(1822 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A1E06 1291 0.0
BF01015A2H08 603 e-172
>BF01024A1E06
Length = 705
Score = 1291 bits (651), Expect = 0.0
Identities = 691/705 (98%)
Strand = Plus / Plus
Query: 32 catcctaaactgtgtttgtgtgtagatttaagaaatctttaaatcctttaatataaattg 91
||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 catcctaaactgtgtgtgtgtgtagatttaagaannctttaaatcctttaatataaattg 60
Query: 92 tgttaaaagcgagagttataaaaaacaatttaatttgtacgaaccaagtttaacgagtgc 151
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 tgttaaaagcgggagttataaaaaacaatttaatttgtacgaaccaagttttacgagtgc 120
Query: 152 actacaagcggaatattgcaaaggctataaataaatacgccatatacaacgttaaatcct 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actacaagcggaatattgcaaaggctataaataaatacgccatatacaacgttaaatcct 180
Query: 212 gttactctacatattgggagattgcataatatttttagattgagaatgcgtctatcgctc 271
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 gttactctacatattgggagattgcataatatttttagattgagaatgcgtctaccgctg 240
Query: 272 tcatcgaataatataaaactaattttttgaaatttaattccattagtttattgaaaagta 331
||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||| |||
Sbjct: 241 tcatcgaataagataaaactatttttttgaaatttaattccattagtctattgaaacgta 300
Query: 332 atgtgacctttcattttttgttaatttaaccatgatatcaggtctttgttattataaaaa 391
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 atgtgacctttcattttttgttaatttaaccatgatagtaggtctttgttattataaaaa 360
Query: 392 tctgacactgtcgtgtcattgggttgttcttaaggataaaagtgctgattttaatggcgt 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctgacactgtcgtgtcattgggttgttcttaaggataaaagtgctgattttaatggcgt 420
Query: 452 cgtctttaaagagttagtgtctcatgggagtggtgtctgattgtatgttatgttgatgct 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgtctttaaagagttagtgtctcatgggagtggtgtctgattgtatgttatgttgatgct 480
Query: 512 tgtggcagcgctggtggtgagttcggtggctgggctccagctagacagccaggcctctac 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtggcagcgctggtggtgagttcggtggctgggctccagctagacagccaggcctctac 540
Query: 572 aagacgaccgagggtcaccaaatacagcaagaccacagttatgccgggaggatccacgga 631
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 541 aagacgaccgagggtcaccaaatacagcaagaccacagttatgccaggaggatccacgga 600
Query: 632 gccagcgacggagagaagtttaatgacagcgacgtatcgtttacatggaggcggagagac 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccagcgacggagagaagtttaatgacagcgacgtatcgtttacatggaggcggagagac 660
Query: 692 ctgtatcctgctaacagtggacgctctccttgatatatcatacgt 736
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctgtatcctgctaacagtggacgctctccttgatatatcatacgt 705
>BF01015A2H08
Length = 661
Score = 603 bits (304), Expect = e-172
Identities = 349/364 (95%)
Strand = Plus / Plus
Query: 1459 ttaattattaaagtatttattttcataaaagcaggtttctccgttggaattaagtttggt 1518
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 53 ttaattattaaagtatttattttcataaaagcggttttctccgttggaattaagtttggt 112
Query: 1519 ttgataagtttgagcgtatatttttgttcgtttttaaagattttaactgatatgattacg 1578
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 113 ttgataagtttgagcgtatattttcgttcgtttttaaagattttaactgatatgattacg 172
Query: 1579 ttatttacgtcatttattttaaacgtcattaattaatttcaagatgtttttattaaaagc 1638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttatttacgtcatttattttaaacgtcattaattaatttcaagatgtttttattaaaagc 232
Query: 1639 ctgatataaatgaattttgatgtttaaaattgttcttgtttttgatattgttctcactga 1698
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ctgatataaatgcattttgatgtttaaaattgttcttgtttttgatattgttctcactga 292
Query: 1699 aatgagagatttttttataaattatattatttaatttttatttcaaacattccagttact 1758
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 293 tatgagagattattttataaattatattatttaatttttatttcgaacattccagttact 352
Query: 1759 atacatattattttattaaaattacttaaaataaccagttaattgtaagcgattgtgttg 1818
|||| | || ||||||||||||||||||||||||| || |||| |||| ||||||||||
Sbjct: 353 atacttgatagtttattaaaattacttaaaataaccggtaaattataagagattgtgttg 412
Query: 1819 tcaa 1822
||||
Sbjct: 413 tcaa 416
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 248,164
Number of extensions: 5768
Number of successful extensions: 5768
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5768
Number of HSP's successfully gapped: 2
Length of query: 1822
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1805
Effective length of database: 8,119,229
Effective search space: 14655208345
Effective search space used: 14655208345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)