BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04254 (UTR included)
(2209 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2156_C1 910 0.0
BF01034B1D07 438 e-122
BF01024A1H11 287 4e-77
BF01049B2F08 268 3e-71
>BF14_2156_C1
Length = 930
Score = 910 bits (459), Expect = 0.0
Identities = 474/479 (98%)
Strand = Plus / Plus
Query: 929 tatgggtttcacaactatgactgagatacaagctaaggctattccaccgttattagaagg 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tatgggtttcacaactatgactgagatacaagctaaggctattccaccgttattagaagg 62
Query: 989 gagagatctcgttggagcagctagaaccggctcaggaaaaacgttagcctttcttatacc 1048
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 63 gagagatctcgttggagcagctagaactggctcaggaaaaacgttagcctttcttatacc 122
Query: 1049 agctattgatttgatctacaaattgaaatttaaacctaggaatggtactggtgtcattat 1108
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggctattgatttgatctacaaattgaaatttaaacctaggaatggtactggtgtcattat 182
Query: 1109 tttgtctccaactagagagttgtcaatgcaaacttttggtgttttgatggaattgatgaa 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttgtctccaactagagagttgtcaatgcaaacttttggtgttttgatggaattgatgaa 242
Query: 1169 ataccatcatcacacttacggattggtcatgggtggcgctaacagaagtacagaggcaca 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ataccatcatcacacttacggattggtcatgggtggcgctaacagaagtacagaggcaca 302
Query: 1229 gaagctttccaaaggtattaatattctggtagcaacacctggcaggcttttagatcacct 1288
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 303 gaagctttccaaaggcattaatattctggtagcaacacccggcaggcttttagatcacct 362
Query: 1289 acaaaacacaccagactttttgtacaaaaatttacagtgccttgtcattgatgaagccga 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acaaaacacaccagactttttgtacaaaaatttacagtgccttgtcattgatgaagccga 422
Query: 1349 ccgaatacttgaaattggatttgaagaggaagttaaacaaataataagattattgccaa 1407
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cagaatacttgaaattggatttgaagaggaagttaaacaaataataagattattgccaa 481
>BF01034B1D07
Length = 834
Score = 438 bits (221), Expect = e-122
Identities = 224/225 (99%)
Strand = Plus / Minus
Query: 1408 cgactatggtagctgaatatccacacggcattgaagggttggcgtttatggcgaatatcc 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 cgactatggtagctgaatatccacacggcattgaagggttggcgtttatggcgaatatcc 166
Query: 1468 ttccgtcggggagtcggtacattttgtttgatgatagcgtctgcgggtccaccctgaact 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ttccgtcggggagtcggtacattttgtttgatgatagcgtctgcgggtccaccctgaact 106
Query: 1528 tgagtccgcctgttgccgcattgactgtgacgtcattctcagtcatctgtataatatttt 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 tgagtccgcctgttgccgcattgactgtgacgtcattctcagtcatctgtataatatttt 46
Query: 1588 cgggtgagaggtccggcagtgaacttgactggcggacgacaggtg 1632
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 45 cgggtgagaggtccggcagtgaacttgactgacggacgacaggtg 1
>BF01024A1H11
Length = 787
Score = 287 bits (145), Expect = 4e-77
Identities = 148/149 (99%)
Strand = Plus / Minus
Query: 1879 agggcgcattttcattggtcgataaggcccgcattcggggtgcgggagatttctgtaacg 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 agggcgcattttcattggtcgataaggcccgcattcggggtgcgggagatttctgtaacg 717
Query: 1939 catgccatagggcccgcaaagagtttatcgttttcactggtcgtcagagcccgcatacgg 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 catgccatagggcccgcaaagagtttatcgttttcactggtcgtcagagcccgcatacgg 657
Query: 1999 ggtgcgggtgatttctataacgcatgcga 2027
||||||||| |||||||||||||||||||
Sbjct: 656 ggtgcgggtaatttctataacgcatgcga 628
>BF01049B2F08
Length = 791
Score = 268 bits (135), Expect = 3e-71
Identities = 147/151 (97%)
Strand = Plus / Plus
Query: 1877 taagggcgcattttcattggtcgataaggcccgcattcggggtgcgggagatttctgtaa 1936
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 466 taagggcgcattttcattggtctataaggcccgcattcggggtgcgggagatttctgtaa 525
Query: 1937 cgcatgccatagggcccgcaaagagtttatcgttttcactggtcgtcagagcccgcatac 1996
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 526 cgcatgccatagggcccgcaaagagtttatcgttttaactggtcgtcagagcccgcatac 585
Query: 1997 ggggtgcgggtgatttctataacgcatgcga 2027
|||||||||| ||||||| ||||||||||||
Sbjct: 586 ggggtgcgggcgatttctctaacgcatgcga 616
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,731
Number of extensions: 8590
Number of successful extensions: 8590
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 8588
Number of HSP's successfully gapped: 4
Length of query: 2209
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2192
Effective length of database: 8,119,229
Effective search space: 17797349968
Effective search space used: 17797349968
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)