BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04261 (UTR included)
(1921 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B2A11 1364 0.0
>BF01057B2A11
Length = 843
Score = 1364 bits (688), Expect = 0.0
Identities = 803/844 (95%), Gaps = 25/844 (2%)
Strand = Plus / Plus
Query: 340 cttgacacaacacggtgtatgaattttataaatattgtttttccgccatttacagctaga 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgacacaacacggtgtatgaattttataaatattgtttttccgccatttacagctaga 60
Query: 400 atactaaattaaagttttatttgttaataagattgagttgttaaaagttgtttaaaaaaa 459
|||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 atactaaattgaggttttatttgttaataagattgagtttttaaaagttgtttaaaaaaa 120
Query: 460 attataaagtttagccagaaaaatattgtaaagccattaagatggatcaaatgcttccaa 519
|| |||||| || | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 121 at-ataaagattggacagaaaaatattgtaaagccattaacatggatcaaatgcttccaa 179
Query: 520 gtccatataacataccaggtattggtactcccttgcaccaacctgaagaagatcaacaga 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gtccatataacataccaggtattggtactcccttgcaccaacctgaagaagatcaacaga 239
Query: 580 ttttaccaaatgctatgcaacagcaacaac------aacaacaac-------------gc 620
|||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 240 ttttaccaaatgctatgcaacagcaacaacaacagcaacaacaacagcagcagcagcagc 299
Query: 621 a----caacaacaac-ttccttggtatcaatgggttcatcgccgctcgtgggttttggcg 675
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aacaacaacaacaacattccttggtatcaatgggttcatcgccgctcgtgggttttggcg 359
Query: 676 cctctataatgggcacacctcagagaacgatgcatacgtatgctccaacagccagctatg 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cctctataatgggcacacctcagagaacgatgcatacgtatgctccaacagccagctatg 419
Query: 736 caacacctcaacagatgatgcaacctcaaacaccgcaaaacttaatgtctccattgataa 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caacacctcaacagatgatgcaacctcaaacaccgcaaaacttaatgtctccattgataa 479
Query: 796 cgggttcaagtatagccggtcaacagatcctaaaccaaatgagtcctgcacccatgacac 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cgggttcaagtatagccggtcaacagatcctaaaccaaatgagtcctgcacccatgacac 539
Query: 856 ctatgactccacattctgcagatcctggaatattacctcagttgcaaaatatagtttcca 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ctatgactccacattctgcagatcctggaatattacctcagttgcaaaatatagtttcca 599
Query: 916 cagtaaatcttaattgcaaattagaccttaaaaagatagccctacatgcccgcaatgctg 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cagtaaatcttaattgcaaattagaccttaaaaagatagccctacatgcccgcaatgctg 659
Query: 976 aatataaccctaaacgttttgctgccgtcattatgaggatacgagaaccaaggactacag 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aatataaccctaaacgttttgctgccgtcattatgaggatacgagaaccaaggactacag 719
Query: 1036 cattgatattttcttctggcaaaatggtttgcaccggtgccaagagtgaagaagactccc 1095
|||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||
Sbjct: 720 cattgatattttcttctggcnnaatggtttgcaccggtgccaagagtgaagangattccc 779
Query: 1096 gtcttgctgcaagaaaatatgccagaattatacaaaagctaggatttacggcaaaatttt 1155
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gtcttgctgcannnnnatatgccagaattatacaaaagctaggatttacggcaaaatttt 839
Query: 1156 tgga 1159
||||
Sbjct: 840 tgga 843
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 342,626
Number of extensions: 20676
Number of successful extensions: 20676
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20674
Number of HSP's successfully gapped: 2
Length of query: 1921
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1904
Effective length of database: 8,119,229
Effective search space: 15459012016
Effective search space used: 15459012016
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)