BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04268 (UTR included)
(1747 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018A1H07 579 e-165
>BF01018A1H07
Length = 315
Score = 579 bits (292), Expect = e-165
Identities = 308/315 (97%)
Strand = Plus / Plus
Query: 404 gaataatactattgtcttgttatttacattatattttctaagtgattgatactcaataag 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaataatactattgtcttgttatttacattatattttctaagtgattgatactcaataag 60
Query: 464 tgtactgtgataagatatactatttatttattttaacatgcaacgcgaagagaaacaact 523
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 tgtactgtgataagatatactatttatttattttaacatgcaacgcgaagntaaacaact 120
Query: 524 tgaagctactttgcatgcaatattaaaccgagtaaacgatttgaaaaccgctatccaagc 583
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaagctactttgnnngntatattaaaccgagtaaacgatttgaaaaccgctatccaagc 180
Query: 584 actaataacaaaattagaaacagaatatgaaacaattaactggcctacattcttggataa 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actaataacaaaattagaaacagaatatgaaacaattaactggcctacattcttggataa 240
Query: 644 ttatgctattttatcaggccatttaacaggtttaagtaaaatacttcaagctgaattggc 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttatgctattttatcaggccatttaacaggtttaagtaaaatacttcaagctgaattggc 300
Query: 704 gccttcattgcgttc 718
|||||||||||||||
Sbjct: 301 gccttcattgcgttc 315
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,780
Number of extensions: 4661
Number of successful extensions: 4661
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4661
Number of HSP's successfully gapped: 1
Length of query: 1747
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1730
Effective length of database: 8,119,229
Effective search space: 14046266170
Effective search space used: 14046266170
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)