BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04294 (UTR included)
(2857 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2156_C1 1713 0.0
>BF14_2156_C1
Length = 930
Score = 1713 bits (864), Expect = 0.0
Identities = 913/928 (98%), Gaps = 1/928 (0%)
Strand = Plus / Plus
Query: 929 tatgggtttcacaactatgactgagatacaagctaaggctattccaccgttattagaagg 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tatgggtttcacaactatgactgagatacaagctaaggctattccaccgttattagaagg 62
Query: 989 gagagatctcgttggagcagctagaaccggctcaggaaaaacgttagcctttcttatacc 1048
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 63 gagagatctcgttggagcagctagaactggctcaggaaaaacgttagcctttcttatacc 122
Query: 1049 agctattgatttgatctacaaattgaaatttaaacctaggaatggtactggtgtcattat 1108
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggctattgatttgatctacaaattgaaatttaaacctaggaatggtactggtgtcattat 182
Query: 1109 tttgtctccaactagagagttgtcaatgcaaacttttggtgttttgatggaattgatgaa 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttgtctccaactagagagttgtcaatgcaaacttttggtgttttgatggaattgatgaa 242
Query: 1169 ataccatcatcacacttacggattggttatgggtggtgctaacagaagtacagaggcaca 1228
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 243 ataccatcatcacacttacggattggtcatgggtggcgctaacagaagtacagaggcaca 302
Query: 1229 gaagctttccaaaggtattaatattctggtagcaacacctggcaggcttttggatcacct 1288
||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 303 gaagctttccaaaggcattaatattctggtagcaacacccggcaggcttttagatcacct 362
Query: 1289 acaaaatacaccagactttttgtacaaaaatttacagtgccttgtcattgatgaagccga 1348
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acaaaacacaccagactttttgtacaaaaatttacagtgccttgtcattgatgaagccga 422
Query: 1349 cagaatacttgaaattggatttgaagaggaagttaaacaaataataagattattgccaaa 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cagaatacttgaaattggatttgaagaggaagttaaacaaataataagattattgccaaa 482
Query: 1409 acggcgtcaaacaatgcttttcagtgctacacagac-aaaaaaaacagaatctttaacag 1467
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 483 acggcgtcaaacaatgcttttcagtgctacacagacaaaaaaaaacagaatctttaacag 542
Query: 1468 ctttggctgttaagcatgaacctgtgtatgttggtgttgatgaccatagagagcaggcta 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctttggctgttaagcatgaacctgtgtatgttggtgttgatgaccatagagagcaggcta 602
Query: 1528 cagtagattctttggaacaaggttatatagtttgcccatcagaaaaaagaatgatggtcc 1587
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 603 cagtagattctttggaacaaggttacatagtttgcccatcagaaaaaagaatgatggtcc 662
Query: 1588 tattcacattccttaagaagaatagaaaaaagaaggttatggttttcttgtcaacttgta 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tattcacattccttaagaagaatagaaaaaagaaggttatggttttcttgtcaacttgta 722
Query: 1648 tgtccgtcaaataccaccatgagctctttaactatattgatctaccagttatgtccatac 1707
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 723 tgtccgtcaaataccaccatgagctctttaactatatcgatctaccagttatgtctatac 782
Query: 1708 atggcaaacaacaacaagcaaaacgcacaacaacatttttccagttttgcaatgccgaga 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 atggcaaacaacaacaagcaaaacgcacaacaacatttttccagttttgcaatgccgaga 842
Query: 1768 gtggaatattattatgtactgatgtggccgctcgaggtttggatatacccgctgttgact 1827
| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 843 gcggaatattattatgtacagatgtggctgctcgaggtttggatatacccgctgttgact 902
Query: 1828 ggatcgttcaatatgaccctccggatga 1855
||||||||||||||||||||||||||||
Sbjct: 903 ggatcgttcaatatgaccctccggatga 930
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 444,215
Number of extensions: 10678
Number of successful extensions: 10678
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10677
Number of HSP's successfully gapped: 1
Length of query: 2857
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2840
Effective length of database: 8,119,229
Effective search space: 23058610360
Effective search space used: 23058610360
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)