BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04296 (UTR included)
(2509 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B1B01 1354 0.0
>BF01024B1B01
Length = 722
Score = 1354 bits (683), Expect = 0.0
Identities = 714/723 (98%), Gaps = 1/723 (0%)
Strand = Plus / Plus
Query: 401 gacgctgtttattataatataaattaaatattttgcatatcttctctttctgcagatatt 460
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 1 gacgctgtttattataatataaattaaatattttgcttatcttctctttctgcaaatatt 60
Query: 461 acaaaaatttaagggcaaataaataagataattttatgaaatggaaacaatactggaaca 520
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaaaaattaaaggg-aaataaataagataattttatgaaatggaaacaatactggaaca 119
Query: 521 acagaggagttatcatgaagaacgagaacgtactatggatgctatggtgaaggaaattct 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 acagaggagttatcatgaagaacgagaacgtactatggatgctatggtgaaggaaattct 179
Query: 581 aaataaaaaaacgggacatcgcgaaacaatcaacgctgatcaccgattgaaaaatttaca 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aaataaaaaaacgggacatcgcgaaacaatcaacgctgatcaccgattgaaaaatttaca 239
Query: 641 cgatcggtatatagaatcttctataagattgaaagagttatatgaggacaaagatggaat 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cgatcggtatatagaatcttctataagattgaaagagttatatgaggacaaagatggaat 299
Query: 701 ccgtaaagaagaaatagcggcattatcaggaccaaatgagtttcaagaattttatgcaag 760
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccgtaaagaagaaatagcagcattatcaggaccaaatgagtttcaagaattttatgcaag 359
Query: 761 acttaaacaaattaaagaatttcacagaaaacatcctaatgagatctgtgttcccatgtc 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 acttaaacaaattaaagaatttcacagaaaacatcctaatgagatctgtgttcccatgtc 419
Query: 821 agtggaatttgaagagttagctaagattagggaaaacccttcagaggattacacaactcc 880
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agtggaatttgaagagttaactaagattagggaaaacccttcagaggattacacaactcc 479
Query: 881 tgttgaatttactgatgaagaaggatatggaaaatacctggatttgcacgagtgttatga 940
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 480 tgttgaatttaccgatgaagaaggatatggaaaatacctggatttgcatgagtgttatga 539
Query: 941 aaagtatattaacttgaagggaatagagaaaatcgattacataacatacctgagtatttt 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaagtatattaacttgaagggaatagagaaaatcgattacataacatacctgagtatttt 599
Query: 1001 cgaccacttgtttgatataccgagggagcgtaaaaacagtgactataggaactatataag 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cgaccacttgtttgatataccgagggagcgtaaaaacagtgactataggaactatataag 659
Query: 1061 agcattactgacttacttgaaggattttgtcaatagagtgaaaccattgatggatcaagc 1120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agcattactgacttacttaaaggattttgtcaatagagtgaaaccattgatggatcaagc 719
Query: 1121 aca 1123
|||
Sbjct: 720 aca 722
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,050
Number of extensions: 7830
Number of successful extensions: 7830
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7829
Number of HSP's successfully gapped: 1
Length of query: 2509
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2492
Effective length of database: 8,119,229
Effective search space: 20233118668
Effective search space used: 20233118668
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)