BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04335 (UTR included)
(2344 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A2C02 1066 0.0
>BF01014A2C02
Length = 831
Score = 1066 bits (538), Expect = 0.0
Identities = 555/562 (98%)
Strand = Plus / Plus
Query: 1 gacgagtggaacgttgtcgaaagcgtaataaaagtggcgcgtaacaaaaaagctgcggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gacgagtggaacgttgtcgaaagcgtaataaaagtggcgcgtaacaaaaaagctgcggcg 329
Query: 61 tgtagtggaccgggcaggtagagtcggcggttcaaagcaataccatcatgggtggctcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tgtagtggaccgggcaggtagagtcggcggttcaaagcaataccatcatgggtggctcgc 389
Query: 121 caccaacgccatcgcacgtctcaatccgcacccgtctgctcgccatgccgcctttccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 caccaacgccatcgcacgtctcaatccgcacccgtctgctcgccatgccgcctttccttt 449
Query: 181 ttcccctaccgcaatgcagctatgtgtcgtttccgctttattttttatgattgtaagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ttcccctaccgcaatgcagctatgtgtcgtttccgctttattttttatgattgtaagctg 509
Query: 241 cagcggagagatatagcgccgcttctctaacaaagacttgagatatggccttctctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cagcggagagatatagcgccgcttctctaacaaagacttgagatatggccttctctttct 569
Query: 301 agcgggggaaggcaaaggagcggggttgtaacgttgtacgctggtggggtctcgtctctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 agcgggggaaggcaaaggagcggggttgtaacgttgtacgctggtggggtctcgtctctc 629
Query: 361 acagtcaattcaaccgctgtttcggacgcacgcaaacgtttataacattccgcgcgaccg 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 630 acagtcaattcaaccgctgtttcggacgcacgcaaacgtttacaacattccgcgcgaccg 689
Query: 421 tgtcaaagagtagttgtgctaacagaactgacagtgaccaacatagagtgaaataagtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tgtcaaagagtagttgtgctaacagaactgacagtgaccaacatagagtgaaataagtgt 749
Query: 481 tcgtgaaagttgatctccaaatggtggtacttgaagacggagtaatgatgactacgaatc 540
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 750 tcgtgaaagttgatctcnnnntggtggtacttgaagacggagtaatgatgactacaaatc 809
Query: 541 cgaatcaatacttgcaaccaga 562
|||| |||||||||||||||||
Sbjct: 810 cgaaccaatacttgcaaccaga 831
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,360
Number of extensions: 19208
Number of successful extensions: 19208
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19208
Number of HSP's successfully gapped: 1
Length of query: 2344
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2327
Effective length of database: 8,119,229
Effective search space: 18893445883
Effective search space used: 18893445883
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)