BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04348 (UTR included)
(1540 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A2H04 1620 0.0
>BF01033A2H04
Length = 845
Score = 1620 bits (817), Expect = 0.0
Identities = 838/845 (99%)
Strand = Plus / Plus
Query: 285 attattattaaattgaaattggttaattatatattaataatgtcttcgattgatttcgat 344
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 1 attattattaaattgaaattgattaattatatattaataatgtcttcgattgattttgat 60
Query: 345 ccttcgattaaactatgtttaaagtatctacattcaagtgcgtcagattcaacagagcaa 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccttcgattaaactatgtttaaagtatctacattcaagtgcgtcagattcaacagagcaa 120
Query: 405 cttcgtttgactctggatgatatgattcgacaaacttacggtaattcaaaaactttaggt 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttcgtttgactctggatgatatgattcgacaaacttacggtaattcaaaaactttaggt 180
Query: 465 aatgtactcccaaaaaaatatctaaatgaggaaaaaatggaatcaccttcgagatcaaag 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgtactcccaaaaaaatatctaaatgaggaaaaaatggaatcaccttcgagatcaaag 240
Query: 525 cacaaaggtgacaaaaatgttacgaaaacagttgcaattccacaacagagcccccaacaa 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacaaaggtgacaaaaatgttacgaaaacagttgcaattccacaacagagcccccaacaa 300
Query: 585 atacaaatacctgaaagagagaacgatgacggttccgtgatggatggagatttatctttc 644
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 301 atacaaatacctgaaagagagaacgatgacggttccgtgatggacggagatttatctttc 360
Query: 645 gatttcctacaagaagatttgaattgcgttgtatgcagacaaattgcagttcaggctgga 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatttcctacaagaagatttgaattgcgttgtatgcagacaaattgcagttcaggctgga 420
Query: 705 aatcgtttagtggaatgtgatgtttgccatgcactttaccatcaggattgtcacaagcct 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatcgtttagtggaatgtgatgtttgccatgcactttaccatcaggattgtcacaagcct 480
Query: 765 gttataagtgataatgacatggcgtcgggatggaagtgtgcatcatgtctgtcatctcag 824
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 481 gttataagtgataatgacatggcgtcgggatggaagtgtgcatcatgtctgtcatcgcag 540
Query: 825 tttccaactgctttcccaaacaaggcttcagaaccaaagtcacccactcaagtctcaggg 884
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttccaactgcttttccaaacaaggcttcagaaccaaagtcacccactcaagtctcaggg 600
Query: 885 tccaccacaccagtgaaaatatctagcagtagttcagcttcctcatccccgtccaaagtg 944
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 601 tccaccacaccagtgaaaatatctagtagtagttcagcttcctcatccccgtccaaagtg 660
Query: 945 gtgacacctaatattaacatcatatccgctgataaacgaatacaaattatgaagaaaaag 1004
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 661 gtgacacctaatattaacatcatatccgccgataaacgaatacaaattatgaagaaaaag 720
Query: 1005 gcagctaaacagcatgaaaaaaagaaaaacaaataaagaatttgtaatgtaaattatgtg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gcagctaaacagcatgaaaaaaagaaaaacaaataaagaatttgtaatgtaaattatgtg 780
Query: 1065 tatcattattacttaatagttattgattttgcttatattaaatgagataaagttaataat 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tatcattattacttaatagttattgattttgcttatattaaatgagataaagttaataat 840
Query: 1125 aattg 1129
|||||
Sbjct: 841 aattg 845
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,318
Number of extensions: 6987
Number of successful extensions: 6987
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6987
Number of HSP's successfully gapped: 1
Length of query: 1540
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1523
Effective length of database: 8,119,229
Effective search space: 12365585767
Effective search space used: 12365585767
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)