BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04354 (UTR included)
(2194 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01008X1C04 1368 0.0
BF01013A1C07 587 e-167
>BF01008X1C04
Length = 738
Score = 1368 bits (690), Expect = 0.0
Identities = 727/738 (98%), Gaps = 1/738 (0%)
Strand = Plus / Plus
Query: 337 gaattgtgcaatctttgtggcatttaaaatcataattttaaatagaaaaatatcatttat 396
||||||||| |||||||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct: 1 gaattgtgcgatctttgtggcatttaaaatcataatattaaaaagaaaactatcatttat 60
Query: 397 aaagtgttacaattttttaatattatatgaaagtgttttgcaattaattttatattttgc 456
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61 aaagtgttacaattttttaatattatatgatagtgttttgcaattaattttatattttgc 120
Query: 457 cattt-ctttaaaaaagttgtttattaaaatttttaactattaccatgaaggcaaaatcg 515
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catttactttaaaaaagttgtttattaaaatttttaactattaccatgaaggcaaaatcg 180
Query: 516 gggttaacaagattttctaattgttatattttgcgtgacggaaacattataaaagaagat 575
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggttaacaagattttccaactgttatattttgcgtgacggaaacattataaaagaagat 240
Query: 576 ttatggatacgcaatggaaaaattgtaaaccctgaacaggtattttatgtagaacaagaa 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttatggatacgcaatggaaaaattgtaaaccctgaacaggtattttatgtagaacaagaa 300
Query: 636 gaagctgacataacggtaaacagcgaagactctctcatagtgccaggatttatagacatt 695
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 gaagctgacataacggtaaacagcgaagactctctcatagtgccagggtttatagacatt 360
Query: 696 caaataaatggtggatggggtgtagatttttcctatgattcagaaaatgttgaagaaggg 755
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 caaataaatggtggatggggtgtagatttttcctacgattcagaaaatgttgaagaaggg 420
Query: 756 gtaaataaagtatcaaaacagctattggctcatggagtgacctcattctgtccaactatg 815
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtaaagaaagtatcaaaacagctattggctcatggagtgacctcattctgtccaactatg 480
Query: 816 gttacatctgagaaagataaatattataagattttacccaaaatacaaaaaaggcaagga 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttacatctgagaaagataaatattataagattttacccaaaatacaaaaaaggcaagga 540
Query: 876 ggagaacatggagctacggttcttggagtgcatcttgaagggccatttattagtttagca 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggagaacatggagctacggttcttggagtgcatcttgaagggccatttattagtttagca 600
Query: 936 aaaaagggtgcacacaaagatgaatatattttaaatcctgaaaaggggctcgaatcaatt 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaaagggtgcacacaaagatgaatatattttaaatcctgaaaaggggctcgaatcaatt 660
Query: 996 aaagaggtgtatggatctttagacaatgtaattttagttacaatagccccagaattgcct 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaagaggtgtatggatctttagacaatgtaattttagttacaatagccccagaattgcct 720
Query: 1056 ggggctttggatgctata 1073
||||||||||||||||||
Sbjct: 721 ggggctttggatgctata 738
>BF01013A1C07
Length = 696
Score = 587 bits (296), Expect = e-167
Identities = 299/300 (99%)
Strand = Plus / Plus
Query: 1895 tagtggcatggaaaatctttattgaagtaaatatatttataaagtcagtacaatttaagt 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31 tagtggcatggaaaatctttattgaagtaaatatatttataaagtcagtacaatttaagt 90
Query: 1955 tcaatagtttccaaaaatattaaagtgcaggttgctgatcacctggcaatgttaaatatg 2014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 tcaatagtttccaaaaatattaaagtgcaggttgctgatcacctggcaatgttaaatatg 150
Query: 2015 attatttcttaattaaaaatacaagctaatattgagaaaactgtaatatgtgaataataa 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 attatttcttaattaaaaatacaagctaatattgagaaaactgtaatatgtgaataataa 210
Query: 2075 catgtatatacctaaataaaatcatgacaaaaatatattttaggcaggctctgaattaca 2134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 catgtatatacctaaataaaatcatgacaaaaatatattttaggcaggctctgaattaca 270
Query: 2135 ctgctctgtgctgttgttatcctggccacagttctcgatagataataaacttaataatta 2194
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 271 ctgctctgtgctgttgttatcctggccacagttctcgatagataataaacttaatcatta 330
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 345,395
Number of extensions: 8297
Number of successful extensions: 8297
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8296
Number of HSP's successfully gapped: 2
Length of query: 2194
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2177
Effective length of database: 8,119,229
Effective search space: 17675561533
Effective search space used: 17675561533
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)