BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04361 (UTR included)
(3220 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2358_C1 1491 0.0
BF01042B1G01 1179 0.0
BF01058B1F12 198 4e-50
>BF14_2358_C1
Length = 1224
Score = 1491 bits (752), Expect = 0.0
Identities = 773/780 (99%)
Strand = Plus / Plus
Query: 1902 aagcggtggttcgctttgaaagacaagaagatgagggcaagagcgaaagggaactaccct 1961
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2 aagcggtggttcgctttgaaagacaagaaaatgagggcaagagcgaaagggaactaccct 61
Query: 1962 cagatcctgctagagatgaacgttatttggaacccgcttaaagcagcgatacgtgtagta 2021
||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 62 cagatcctgctggagatgaacgttatttggaacccgcttaaagctgctatacgtgtagta 121
Query: 2022 aaccctaaagaggcaaaatatatgtatcaagaggccaaattcaaaagacaactatttata 2081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaccctaaagaggcaaaatatatgtatcaagaggccaaattcaaaagacaactatttata 181
Query: 2082 cgaaatgtagtgagactgaaggctataattatgtggttcatcgaagttggaaaaatcctg 2141
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 182 cgaaatgtagtgagactgaaggctataattatgtggttcatcgaagttggcaaaatcctg 241
Query: 2142 cagaactgctttgaatgggagtcaagagtacgatcattagcggggctggcggtctggctg 2201
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 242 cagaactgctttgaatgggagtcaagagtacgatcattggcggggctggcggtctggctg 301
Query: 2202 gcgttctgctactattatcagatgtggatgctgccgttcctaatgctgatgctgttcgcg 2261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcgttctgctactattatcagatgtggatgctgccgttcctaatgctgatgctgttcgcg 361
Query: 2262 agaaactggctggtttatacattgactgatggcaacccattattgcaacctgtggatgac 2321
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agaaactggctggtttatagattgactgatggcaacccattattgcaacctgtggatgac 421
Query: 2322 gacgatttacttgctgaagaagatgatgaggaagaagtggataaggaggaaaagaaatct 2381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gacgatttacttgctgaagaagatgatgaggaagaagtggataaggaggaaaagaaatct 481
Query: 2382 cttaaagaaaggctgcaagctatacaagaagtcacacagacggttcaaaacgcgattgga 2441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cttaaagaaaggctgcaagctatacaagaagtcacacagacggttcaaaacgcgattgga 541
Query: 2442 tacgtcgcttcgttgggtgaagccgttaaaaacctaatgaacttcacagtgccgtatctt 2501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tacgtcgcttcgttgggtgaagccgttaaaaacctaatgaacttcacagtgccgtatctt 601
Query: 2502 agctacatagctataattatgctatttggagctatgtttgtgctatacttgatacctttg 2561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agctacatagctataattatgctatttggagctatgtttgtgctatacttgatacctttg 661
Query: 2562 agatatcttcttatggcttggggtataaacaaatttacaaggaagatactccggccacat 2621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agatatcttcttatggcttggggtataaacaaatttacaaggaagatactccggccacat 721
Query: 2622 acaataccaaataatgaggtcatcgacctcttgtcgcgagtgccagatgacgagatatta 2681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 acaataccaaataatgaggtcatcgacctcttgtcgcgagtgccagatgacgagatatta 781
Score = 624 bits (315), Expect = e-178
Identities = 328/331 (99%), Gaps = 1/331 (0%)
Strand = Plus / Plus
Query: 2818 acgatatttcgcttagattatttgtaaacgattatattagttaaaccgttgcttaatttt 2877
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 894 acgatatttcgcttagattatttgtaaacgattatattagttaaaccgttgattaatttt 953
Query: 2878 aagaagttaatttttcatgtcttattggcggcaatcatgggtgttgccatggttaaaaat 2937
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 954 aagaagttaatttttcatgtcttattggcggcaatcatgagtgttgccatggttaaaaat 1013
Query: 2938 attaatgtgatagaaaatgccgtatttaaatctggtagtaatgtaatgtacctgttttta 2997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 attaatgtgatagaaaatgccgtatttaaatctggtagtaatgtaatgtacctgttttta 1073
Query: 2998 cgtccactagaggttctgttaatgtaataacaaaattgacaatgtcaaaacaaacaagat 3057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 cgtccactagaggttctgttaatgtaataacaaaattgacaatgtcaaaacaaacaagat 1133
Query: 3058 tgttaatat-aaaaaaaattttcttcctatcagtacattcatagtttttttatttataat 3116
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 tgttaatataaaaaaaaattttcttcctatcagtacattcatagtttttttatttataat 1193
Query: 3117 taaagttggactcgagttatactttttctga 3147
|||||||||||||||||||||||||||||||
Sbjct: 1194 taaagttggactcgagttatactttttctga 1224
>BF01042B1G01
Length = 838
Score = 1179 bits (595), Expect = 0.0
Identities = 627/637 (98%), Gaps = 3/637 (0%)
Strand = Plus / Plus
Query: 22 cgttacgccagatgttcgaagcaaacgaaatcataacaattgtttcttaaaataagtctg 81
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 cgttacgccagatgttcgaagcaaaccaaatcataacaattgtttcttaaaataagtctg 60
Query: 82 gtatcctgatataggttgtttatttgaatttggaaacaatcttgagatagagcagtttta 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtatcctgatataggttgtttatttgaatttggaaacaatcttgagatagagcagtttta 120
Query: 142 acactgaatcgtataacacgttgaaaacattcaagatggaaatggcaatactgagaaact 201
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acactgaattgtata---cgttgaaaacattcaagatggaaatggcaatactgagaaact 177
Query: 202 agtgtttggaatatatagtgtaatccgttttaagtggaaacatgtcagaaaataaaatgg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 agtgtttggaatatatagtgtaatccgttttaagtggaaacatgtcagaaaataaaatgg 237
Query: 262 agagatttaaacaaaagttaattaaactgcaagataaacttcacaatcgtgttgaagata 321
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 238 agagatttaaacaaaagttaattaaactgcaagataaacttcacaatcgcgttgaagata 297
Query: 322 taaacgatcagcttcaaaacaaaatagaatctaaaatagcaagacttgtctcacatatat 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 taaacgatcagcttcaaaacaaaatagaatctaaaatagcaagacttgtctcacatatat 357
Query: 382 catatgatagaagttccactgatgataattacgaagataaagatgagactacatcgcaat 441
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 358 catatgatagaagttccactgatgacaattacgatgataaagatgagactacatcgcaat 417
Query: 442 cggatacaaaagaacaaatttcaataccttccgttgtcattgacggaacaaattgcatta 501
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 418 cggatacaaaagaacaaatttctataccttccgttgtcattgacggaacaaattgcatta 477
Query: 502 tggatgaagatccaatacgagtttgtaaagattttcttacggttgaaaagaatggattgt 561
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tggatgaagatccaatacaagtttgtaaagattttcttacggttgaaaagaatggattgt 537
Query: 562 taacacgcagatgtcggtcgacatcaaatcttattttggatgaaaactccagcctttaca 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 taacacgcagatgtcggtcgacatcaaatcttattttggatgaaaactccagcctttaca 597
Query: 622 gctcaagtgattcgtgtttatcttcgtgtgatgaacg 658
|||||||||||||||||||||||||||||||||||||
Sbjct: 598 gctcaagtgattcgtgtttatcttcgtgtgatgaacg 634
>BF01058B1F12
Length = 217
Score = 198 bits (100), Expect = 4e-50
Identities = 112/116 (96%)
Strand = Plus / Plus
Query: 2174 atcattagcggggctggcggtctggctggcgttctgctactattatcagatgtggatgct 2233
||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcattaccgggcctggcggtttggctggcgttctgctactattatcagatgtggatgct 60
Query: 2234 gccgttcctaatgctgatgctgttcgcgagaaactggctggtttatacattgactg 2289
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 gccgttcctaatgctgatgctgttcgcgagaaactggctggtttatagattgactg 116
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 361,041
Number of extensions: 6830
Number of successful extensions: 6830
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6826
Number of HSP's successfully gapped: 4
Length of query: 3220
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3202
Effective length of database: 8,109,745
Effective search space: 25967403490
Effective search space used: 25967403490
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)