BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04400 (UTR included)
(3274 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2861_C1 1245 0.0
>BF14_2861_C1
Length = 856
Score = 1245 bits (628), Expect = 0.0
Identities = 667/679 (98%), Gaps = 2/679 (0%)
Strand = Plus / Plus
Query: 302 tctgttatttagaaacagaacagaaaaaccgaaaaatatat--cacttaaatttcaattc 359
|||||||||||| |||||||||||||||||||||||| || || ||||||||||||||
Sbjct: 8 tctgttatttagtaacagaacagaaaaaccgaaaaattcattccatttaaatttcaattc 67
Query: 360 aacaataagtgtacataagttcacatataaaagtcaagttgctaattatatggccatata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aacaataagtgtacataagttcacatataaaagtcaagttgctaattatatggccatata 127
Query: 420 gctcgcatcagtgaatgtgtggtgataatttcttgaagattgatcgatttcatcgtcata 479
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gctcacatcagtgaatgtgtggtgataatttcttgaagattgatcgatttcatcgtcata 187
Query: 480 cgcttgcttgtatatttcgatatgcttccccgttcatattacacggaacaagacataagg 539
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cgcttgcttctatatttcgatatgcttccccgttcatattacacggaacaagacataagg 247
Query: 540 aagcggcagattgatacattaaaaatatttaatgacaatgttactgagattgttgaaaat 599
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaacggcagattgatacattaaaaatatttaatgacaatgttactgagattgttgaaaat 307
Query: 600 acggaatacaaagtcgatttttccgctaatggacacaacttaaatcttacagtgattctt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 acggaatacaaagtcgatttttccgctaatggacacaacttaaatcttacagtgattctt 367
Query: 660 aactctgaatttcctaatgagaagcctaacatattcgtaagccctgtctttcctcacccg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aactctgaatttcctaatgagaagcctaacatattcgtaagccctgtctttcctcacccg 427
Query: 720 tggcttgctgaaaactcaaaccaagtgattggtgcaccaggattggtgaactatagtcca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tggcttgctgaaaactcaaaccaagtgattggtgcaccaggattggtgaactatagtcca 487
Query: 780 cattctgatttaggacgggttgttcaagttattatacgcgaatttcagcgttcagcacct 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cattctgatttaggacgggttgttcaagttattatacgcgaatttcagcgttcagcaccc 547
Query: 840 aatatatacggtcacgaagataagtccacagacaccagcccaatgtcgcactatagcaac 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aatatatacggtcacgaagataagtccacagacaccagcccaatgtcgcactatagcaac 607
Query: 900 caatcgctgatgtttccagagttgaatgaactatctattgacgaattacaggagatcatt 959
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 608 caatcgctgatgtttccagagttgaatgaactatccattgacgaattacaggagatcatt 667
Query: 960 gagaatcctgatctacagg 978
|| ||||||||||||||||
Sbjct: 668 gaaaatcctgatctacagg 686
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 400,746
Number of extensions: 22796
Number of successful extensions: 22796
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 22795
Number of HSP's successfully gapped: 1
Length of query: 3274
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3256
Effective length of database: 8,109,745
Effective search space: 26405329720
Effective search space used: 26405329720
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)