BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04403 (UTR included)
(1216 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 119 1e-26
BF01031B2E06 105 2e-22
BF14_335_C2 101 3e-21
BF01060B1D11 96 2e-19
BF01037A2H12 72 2e-12
BF01043B1E03 70 9e-12
>BF01047B2H03
Length = 758
Score = 119 bits (60), Expect = 1e-26
Identities = 93/103 (90%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 722 caagatacggatatattgaagtctt--attcggcaagacgagaatgataaatataaaatt 779
||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||
Sbjct: 552 caagatacggatatattgaagtcttttattcggcaagacgagaatgatggatataacatc 493
Query: 780 catgcaatgaggttaaagatgcagaacgagtggttggacatag 822
||||||||||| ||| | ||||||||||||||||| |||||||
Sbjct: 492 catgcaatgagtttagatatgcagaacgagtggttagacatag 450
>BF01031B2E06
Length = 707
Score = 105 bits (53), Expect = 2e-22
Identities = 167/203 (82%), Gaps = 9/203 (4%)
Strand = Plus / Plus
Query: 999 aaccaacatccccaaagaccataccatcaagatcaataaatattacg-agctcacaaacg 1057
|||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| || |
Sbjct: 438 aaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa-g 496
Query: 1058 aactcgaattaggttcgtcgtggatttgtacgcggtagaagtgggagcgagaggtataac 1117
|| ||||||||| | |||||||||||||||||||||||||||| | | |||
Sbjct: 497 aa-------taggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgttgtaaa 549
Query: 1118 agcaaaatctttctacaacctactaaaagacctgggtctgtccacaactaatatcaattc 1177
||| |||||| || |||||||||||||| | |||| ||||||| | |||| ||||| |
Sbjct: 550 agctaaatctctccacaacctactaaaaaccttgggcctgtccagatctaacatcaaata 609
Query: 1178 attcttggaacgtacttcgaagg 1200
|| || |||| |||||||||||
Sbjct: 610 atctttagaacatacttcgaagg 632
>BF14_335_C2
Length = 1827
Score = 101 bits (51), Expect = 3e-21
Identities = 96/111 (86%)
Strand = Plus / Minus
Query: 1106 gagaggtataacagcaaaatctttctacaacctactaaaagacctgggtctgtccacaac 1165
||||||||||||||| |||||| |||||| |||||||||| || |||| ||||||| |||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 1166 taatatcaattcattcttggaacgtacttcgaaggaagtcctagtaggttc 1216
||| | || ||||||||| ||||||||||||||| || |||||||||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttc 997
>BF01060B1D11
Length = 799
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/103 (87%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 722 caagatacggatatattgaagtctt--attcggcaagacgagaatgataaatataaaatt 779
||||||| |||||||||||||| || |||| |||||||||||||||| |||||| ||
Sbjct: 380 caagatatggatatattgaagtattttattcagcaagacgagaatgatggatataagatc 321
Query: 780 catgcaatgaggttaaagatgcagaacgagtggttggacatag 822
||||||||| | ||| ||||||||||||||||||| |||||||
Sbjct: 320 catgcaatgcgtttagagatgcagaacgagtggttagacatag 278
>BF01037A2H12
Length = 773
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1081 atttgtacgcggtagaagtgggagcgagaggtataacagcaaaatctttctacaacctac 1140
||||||||| |||| |||| |||||||||||||||| ||| |||||| || ||||||| |
Sbjct: 672 atttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgacaacctgc 731
Query: 1141 taaaagac 1148
||||||||
Sbjct: 732 taaaagac 739
>BF01043B1E03
Length = 830
Score = 69.9 bits (35), Expect = 9e-12
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 1099 tgggagcgagaggtataacagcaaaatctttctacaacctactaaaagacctgggtctgt 1158
|||||| | ||||||||||||| |||| ||||||||||||| ||| || || | |||
Sbjct: 204 tgggagtgcgaggtataacagcttcatctctctacaacctactgaaacacttgagcctgc 263
Query: 1159 ccacaactaatatcaattcattcttggaacgtact 1193
||| |||||| ||||| ||||||||||||||||||
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtact 298
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 152,646
Number of extensions: 3574
Number of successful extensions: 3574
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 3572
Number of HSP's successfully gapped: 7
Length of query: 1216
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1199
Effective length of database: 8,119,229
Effective search space: 9734955571
Effective search space used: 9734955571
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)