BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04407 (UTR included)
(1876 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A1F04 1140 0.0
>BF01044A1F04
Length = 681
Score = 1140 bits (575), Expect = 0.0
Identities = 596/603 (98%)
Strand = Plus / Plus
Query: 495 ttaatcatgtcgtcagataaggtgttccactcgcgatcgcagggcataccctcagagggg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ttaatcatgtcgtcagataaggtgttccactcgcgatcgcagggcataccctcagagggg 96
Query: 555 gtgaaggatcagtacgccgacgggaaagcagccagggtgtggaagaagtacatcggagac 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 gtgaaggatcagtacgccgacgggaaagcagccagggtgtggaagaagtacatcggagac 156
Query: 615 agcaaccagaggacgaagaactaccgggacttcctcacaggcctgctcaggagacacgga 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 agcaaccagaggacgaagaactaccgggacttcctcacaggcctgctcaggagacacgga 216
Query: 675 tgtaagacggtgctggacgtagcctgtgggacggggatcgattccatgatgttgttggat 734
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 217 tgtaagacggtgctggacgtagcctgtgggacggggatcgactccatgatgttgttggat 276
Query: 735 gagggcttcaaggtagtctccgtggacgcgtcagataagatgctgaaacacgcgctgaaa 794
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 277 gagggcttcaaagtagtctccgtggacgcctcagataagatgctgaaacacgcgctgaaa 336
Query: 795 gctcgctgggagagacggagggagcagagatacgatgagtgggtgatcgaagaagccaac 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gctcgctgggagagacggagggagcagagatacgatgagtgggtgatcgaagaagccaac 396
Query: 855 tggcagactttgccgcaggatgtcgaacaattcatgccaggagtgcagttcgatgctgta 914
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tggcagactttgccgcaggatgtcgaacaattcatgccaggagtgcagttcgatgctgtc 456
Query: 915 atatgtttagggaactcgttcgcacatttactggacgagtacgaagaccagagaacacag 974
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 457 atatgtttagggaactcgttcgcacatttactggacgagtacgaggaccagaggacacag 516
Query: 975 aagatgtgcttgaggaacttcgcacaagtactgaagcccggcggcctgttgttcatagat 1034
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 517 aagatgtgcttgaggaacttcgcacaagtactgaagcccggcggccttttgttcatagat 576
Query: 1035 cacaggaattatgactccatgatcaacaggggagccacgcctggacactctatatattat 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 cacaggaattatgactccatgatcaacaggggagccacgcctggacactctatatattat 636
Query: 1095 aat 1097
|||
Sbjct: 637 aat 639
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,678
Number of extensions: 4904
Number of successful extensions: 4904
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4904
Number of HSP's successfully gapped: 1
Length of query: 1876
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1859
Effective length of database: 8,119,229
Effective search space: 15093646711
Effective search space used: 15093646711
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)