BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04442 (UTR included)
(2389 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A1E02 355 2e-97
>BF01024A1E02
Length = 781
Score = 355 bits (179), Expect = 2e-97
Identities = 182/183 (99%)
Strand = Plus / Plus
Query: 838 ctcaacttgacgaaacgtgcaccacaattgaaggtggtgttggcaagtgtgagtcgttag 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ctcaacttgacgaaacgtgcaccacaattgaaggtggtgttggcaagtgtgagtcgttag 417
Query: 898 cagcctgcgagccgtaccttcatctgacgagacaagccaaaaacattcccttggctattc 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cagcctgcgagccgtaccttcatctgacgagacaagccaaaaacattcccttggctattc 477
Query: 958 aacttagagatgctcaatgcggttcagacggaaacgaccaaaaggtctgctgtcctactt 1017
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 478 aacttagagatgctcaatgcggttcagacggaaacgaccaaaaggtctgctgccctactt 537
Query: 1018 cag 1020
|||
Sbjct: 538 cag 540
Score = 256 bits (129), Expect = 1e-67
Identities = 162/173 (93%)
Strand = Plus / Plus
Query: 491 cgtacacgccatgtcacctcctcacgtaatgagtagtgctctgttgacagtgctgtgtgt 550
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cgtacacgccatgttacctcctcacgtaatgagtagtgctctgttgacagtgctgtgtgt 70
Query: 551 ctgtttgtgtccacaagctgtgttttgtcaataccaggaaacttgcaccacattagaagg 610
|||||||||||| |||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 71 ctgtttgtgtccccaagctgtgttttgtcaataccaggacacttgcaccacattggaggg 130
Query: 611 tggcatcggaacatgtacgccaactatcttatgcgctccgtacttcaatctgc 663
|||||||||||| ||||||||| || ||| ||||||| |||||||| ||||||
Sbjct: 131 tggcatcggaacgtgtacgccagctgtctcatgcgctgcgtacttcgatctgc 183
Score = 155 bits (78), Expect = 4e-37
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 1167 ggtgacttcccctggatggcacttcttggtaccaaacaaggaaactgggacgcagcacgt 1226
|||| ||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 684 ggtggctttccctggatggcacttcttggtaccaaacaagaaaactgggacacagcacgt 743
Query: 1227 tggatatgtgggggaactctgatctctcaccgccacgt 1264
|||||||||||||||| |||||||||||||||||||||
Sbjct: 744 tggatatgtgggggaagtctgatctctcaccgccacgt 781
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 288,942
Number of extensions: 5908
Number of successful extensions: 5908
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5908
Number of HSP's successfully gapped: 3
Length of query: 2389
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2372
Effective length of database: 8,119,229
Effective search space: 19258811188
Effective search space used: 19258811188
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)