BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN04455 (UTR included)
(1594 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A2C03 636 0.0
BF01050B2B10 80 1e-14
>BF01060A2C03
Length = 342
Score = 636 bits (321), Expect = 0.0
Identities = 324/325 (99%)
Strand = Plus / Plus
Query: 452 acgctcagcgctaacgcacgcactcacaactcacacaccaatgtctaccatgtcttacga 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgctcagcgctaacgcacgcactcacaactcacacaccaatgtctaccatgtcttacga 60
Query: 512 tctcgcgtacccgatcacggacgacggcccgcagcccgtctcgcgcacttatcaatatcg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctcgcgtacccgatcacggacgacggcccgcagcccgtctcgcgcacttatcaatatcg 120
Query: 572 caaagtgatgaagccgatgctcgagcgcaaaaggcgcgctcgcatcaaccgctgtctcga 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaagtgatgaagccgatgctcgagcgcaaaaggcgcgctcgcatcaaccgctgtctcga 180
Query: 632 tgagctcaaggaactcatggtcagcgctctccaatcggaaggtgaaaacgtcgccaaact 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgagctcaaggaactcatggtcagcgctctccaatcggaaggtgaaaacgtcgccaaact 240
Query: 692 ggaaaaagccgatattttggaattgactgtgaaccatcttcataaactccgccgacaacg 751
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 ggaaaaagccgatattttggaattgactgtgaaccatcttcataagctccgccgacaacg 300
Query: 752 tcgcctgtctctgaactcgacagtc 776
|||||||||||||||||||||||||
Sbjct: 301 tcgcctgtctctgaactcgacagtc 325
>BF01050B2B10
Length = 758
Score = 79.8 bits (40), Expect = 1e-14
Identities = 115/140 (82%)
Strand = Plus / Plus
Query: 573 aaagtgatgaagccgatgctcgagcgcaaaaggcgcgctcgcatcaaccgctgtctcgat 632
||||| |||||||||||| | ||| | || || || || |||||||| |||||||||||
Sbjct: 179 aaagttatgaagccgatgttggagaggaagagacgagcgcgcatcaatcgctgtctcgac 238
Query: 633 gagctcaaggaactcatggtcagcgctctccaatcggaaggtgaaaacgtcgccaaactg 692
||||| || || |||||||||| ||| ||||| ||||||| || |||||| |||| |||
Sbjct: 239 gagctgaaagacctcatggtcaccgcactccaggcggaaggagagaacgtctccaagctg 298
Query: 693 gaaaaagccgatattttgga 712
|| |||||||| || |||||
Sbjct: 299 gagaaagccgacatattgga 318
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 189,775
Number of extensions: 5042
Number of successful extensions: 5042
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5042
Number of HSP's successfully gapped: 2
Length of query: 1594
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1577
Effective length of database: 8,119,229
Effective search space: 12804024133
Effective search space used: 12804024133
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)